WormBase Tree Display for Gene: WBGene00000173
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| WBGene00000173 | Evidence | Person_evidence | WBPerson548 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | C35A5 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | aqp-5 | Person_evidence | WBPerson300 | |||||
| Sequence_name | C35A5.1 | ||||||||
| Molecular_name | C35A5.1 | ||||||||
| C35A5.1.1 | |||||||||
| CE42929 | |||||||||
| Other_name | CELE_C35A5.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | aqp-5 | ||||||||
| DB_info | Database | AceView | gene | 5K969 | |||||
| WormQTL | gene | WBGene00000173 | |||||||
| WormFlux | gene | WBGene00000173 | |||||||
| NDB | locus_tag | CELE_C35A5.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000173|UniProtKB=Q18469 | |||||||
| family | PTHR45665 | ||||||||
| NCBI | gene | 183221 | |||||||
| RefSeq | protein | NM_073290.5 | |||||||
| TrEMBL | UniProtAcc | Q18469 | |||||||
| UniProt_GCRP | UniProtAcc | Q18469 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aqp | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061317 | ||||||||
| 00061318 | |||||||||
| 00061319 | |||||||||
| 00061320 | |||||||||
| 00061321 | |||||||||
| 00061322 | |||||||||
| 00106939 | |||||||||
| 00106940 | |||||||||
| 00106941 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00000172 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000174 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00000169 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000170 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000171 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000175 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00000176 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | aqp-5 encodes a putative aquaporin with no known substrate, since AQP-5 expressed in Xenopus oocytes has no effect on water, glycerol, or urea permeability; AQP-5 also has no function in mass RNAi assays, perhaps reflecting genetic redundancy with its paralogs AQP-4 and AQP-6; AQP-5 is expressed in I1 and I2 pharyngeal interneurons, and is orthologous to human AQP8 (OMIM:603750). | Paper_evidence | WBPaper00029039 | |||||
| WBPaper00030907 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 12 Aug 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable water channel activity. Predicted to be involved in water transport. Located in cell surface. Expressed in I1L; I1R; I2L; and I2R. Is an ortholog of human AQP8 (aquaporin 8). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C35A5.1 | |||||||
| Corresponding_CDS_history | C35A5.1:wp193 | ||||||||
| Corresponding_transcript | C35A5.1.1 | ||||||||
| Other_sequence | FG647856.1 | ||||||||
| Associated_feature | WBsf647162 | ||||||||
| WBsf232386 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041945 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029560 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011639 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4775 | ||||||||
| Expr15317 | |||||||||
| Expr1013541 | |||||||||
| Expr1030098 | |||||||||
| Expr1145952 | |||||||||
| Expr2009382 | |||||||||
| Expr2027618 | |||||||||
| Drives_construct | WBCnstr00012235 | ||||||||
| WBCnstr00037687 | |||||||||
| Construct_product | WBCnstr00037687 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (59) | |||||||||
| Interaction (60) | |||||||||
| Map_info | Map | V | Position | 2.57003 | Error | 0.000173 | |||
| Positive | Positive_clone | C35A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027012 | ||||||||
| WBPaper00029039 | |||||||||
| WBPaper00033469 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
