WormBase Tree Display for Gene: WBGene00000174
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WBGene00000174 | Evidence | Person_evidence | WBPerson548 | ||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C32C4 | ||||
Identity | Version | 2 | |||||
Name | CGC_name | aqp-6 | Person_evidence | WBPerson300 | |||
Sequence_name | C32C4.2 | ||||||
Molecular_name | C32C4.2a | ||||||
C32C4.2a.1 | |||||||
CE05345 | |||||||
C32C4.2b | |||||||
CE44791 | |||||||
C32C4.2c | |||||||
CE47018 | |||||||
C32C4.2b.1 | |||||||
C32C4.2c.1 | |||||||
Other_name | CELE_C32C4.2 | Accession_evidence | NDB | BX284605 | |||
Public_name | aqp-6 | ||||||
DB_info | Database | AceView | gene | 5L131 | |||
WormQTL | gene | WBGene00000174 | |||||
WormFlux | gene | WBGene00000174 | |||||
NDB | locus_tag | CELE_C32C4.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00000174|UniProtKB=H2FLH4 | |||||
family | PTHR45687 | ||||||
NCBI | gene | 183121 | |||||
RefSeq | protein | NM_001269317.4 | |||||
NM_001269319.3 | |||||||
NM_001269316.4 | |||||||
TrEMBL | UniProtAcc | H2FLH4 | |||||
Q18352 | |||||||
D5MCS1 | |||||||
UniProt_GCRP | UniProtAcc | H2FLH4 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | aqp | ||||||
Allele (52) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (11) | |||||||
Ortholog (37) | |||||||
Paralog | WBGene00000172 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00000173 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00000169 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000170 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000171 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000175 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00000176 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | apq-6 encodes an aquaporin whose expression in Xenopus oocytes increases water permeability five- to seven-fold; AQP-6 is expressed in the cilia and cell bodies of IL1 sensory neurons; AQP-6 is orthologous to human AQP8 (OMIM:603750). | Paper_evidence | WBPaper00029039 | |||
WBPaper00030907 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson567 | |||||||
Date_last_updated | 21 Nov 2011 00:00:00 | ||||||
Automated_description | Enables water channel activity. Involved in water transport. Located in neuronal cell body and non-motile cilium. Expressed in IL1 neuron. Is an ortholog of human AQP8 (aquaporin 8). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C32C4.2a | |||||
C32C4.2b | |||||||
C32C4.2c | |||||||
Corresponding_CDS_history | C32C4.2d:wp261 | ||||||
Corresponding_transcript | C32C4.2a.1 | ||||||
C32C4.2b.1 | |||||||
C32C4.2c.1 | |||||||
Other_sequence (16) | |||||||
Associated_feature | WBsf1001157 | ||||||
Experimental_info | RNAi_result | WBRNAi00029409 | Inferred_automatically | RNAi_primary | |||
WBRNAi00011472 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041660 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4776 | ||||||
Expr1011216 | |||||||
Expr1145683 | |||||||
Expr2009383 | |||||||
Expr2027619 | |||||||
Drives_construct | WBCnstr00012236 | ||||||
WBCnstr00037686 | |||||||
WBCnstr00040527 | |||||||
Construct_product | WBCnstr00037686 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (125) | |||||||
SAGE_tag | SAGE:gaggaacactcctgctg | Strand | Antisense | ||||
SAGE:ccgtctgctatgtggtc | Strand | Sense | |||||
Unambiguously_mapped | |||||||
SAGE:ccgtctgcta | Strand | Sense | |||||
Unambiguously_mapped | |||||||
Interaction (44) | |||||||
Map_info | Map | V | Position | 2.67018 | Error | 0.002544 | |
Positive | Positive_clone | C32C4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00029039 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |