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WormBase Tree Display for Gene: WBGene00153346

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Name Class

WBGene00153346SMapS_parentSequenceCbre_Contig35
IdentityVersion2
NameCGC_nameCbn-unc-45From_analysisInferred_from_orthology
Sequence_nameCBN14621
Molecular_nameCBN14621
CBN14621.1
CN30946
Public_nameCbn-unc-45
SpeciesCaenorhabditis brenneri
HistoryVersion_change101 Oct 2008 13:29:51WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:11WBPerson4025Name_changeCGC_nameCbn-unc-45
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKMWBls:000000211.5056From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
11.7226From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
12.7358From_analysisRNASeq.brenneri.WBls:0000002.control_mean
14.8229From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
15.3974From_analysisRNASeq.brenneri.WBls:0000002.control_median
15.9719From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
16.0735From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
17.038From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
17.3092From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
22.9138From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
WBls:000000411.3848From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
22.7696From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
WBls:00000240From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
22.4648From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
26.1582From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
26.1693From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
30.3707From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
33.4042From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
WBls:000003837.8457From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
38.934From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
40.0223From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:000004115.4651From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100777
16.688From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100780
17.1541From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100779
19.2372From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191968
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191965
RNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX103657
20.1476From_analysisRNASeq.brenneri.WBls:0000041.control_mean
20.5116From_analysisRNASeq.brenneri.WBls:0000041.control_median
21.786From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100773
22.2517From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX103654
24.4425From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191969
25.8155From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100775
26.8045From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191970
27.441From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100776
43.2729From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191967
43.6985From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191966
9.04712From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100774
9.25822From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100778
WBls:000010117.038From_analysisRNASeq.brenneri.total_over_all_stages.control_median
17.7535From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
OrthologWBGene00006781Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00035594Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00064906Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00114420Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00138144Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
CBOVI.g5876Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2483Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g99Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12969Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g10604Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g22485Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21091Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12086Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3758Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7014Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6814Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00691.g13480Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-45Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_III.g8541Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g16717Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00890.g16508Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_18598Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_21811Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_011838Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g14343Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g8350Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30336220Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00223974Brugia malayiFrom_analysisWormBase-Compara
chrIII_pilon.g6765Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240035Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00276807Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00255836Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289133Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00139131Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139373Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153413Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154000Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161244Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164684Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191386Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00192704Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: Myosin-binding striated muscle assembly central; Tetratricopeptide repeat; Armadillo-type fold; Armadillo-like helical; UNC-45/Cro1/She4, central domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans unc-45. In C. elegans, unc-45 is involved in several processes, including chaperone-mediated protein folding; egg-laying behavior; and sarcomere organization.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN14621
Corresponding_CDS_historyCBN14621:np197
Corresponding_transcriptCBN14621.1
Other_sequenceCBC04253_1
EY468384.1
ES742083.1
Oden_isotig28207
FC543786.1
Dviv_isotig29345
CRC08887_1
Dviv_isotig24081
Hbac_isotig05667
Tcir_isotig31912
Oden_isotig22248
EY470353.1
HC05076
EY465578.1
Tcir_isotig07284
AS12715
JI468583.1
CR01326
AS16872
CJC00483_1
Oden_isotig10578
Tcir_isotig13503
JI462095.1
JI480337.1
Tcol_isotig23498
ACC13133_1
CJC06114_1
ACC23565_1
ASC11883_1
EY472119.1
HBC05731_1
FC549049.1
MCC03546_1
FC551809.1
BXC05538_1
FC540625.1
HC04506
Oden_isotig10579
ES742066.1
JI164996.1
Oden_isotig10580
ACC05710_1
EY464034.1
EY464071.1
EX009654.1
Oden_isotig10577
EY472940.1
MC01985
Acan_isotig07709
HCC02384_1
ASC21642_1
HC04003
CR09552
JO470621.1
EY472939.1
FC554339.1
Experimental_infoMicroarray_resultsGPL14142_CBN14621_2129-2188_0.890_37_A
GPL14142_CBN14621_2331-2390_0.919_17_B
GPL14142_CBN14621_2551-2610_0.898_31_C
MethodGene