Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00192704

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00192704SMapS_parentSequenceCbre_Contig235
IdentityVersion1
NameSequence_nameCBN30739
Molecular_nameCBN30739
CBN30739.1
CN36501
Public_nameCBN30739
SpeciesCaenorhabditis brenneri
HistoryVersion_change120 May 2009 11:55:53WBPerson1847EventCreated
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000020From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565026
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565027
RNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565030
2.34582From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565024
2.4559From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565023
2.53971From_analysisRNASeq.brenneri.WBls:0000002.control_median
2.62351From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565032
2.84985From_analysisRNASeq.brenneri.WBls:0000002.control_mean
3.69467From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565025
4.51074From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565029
5.76946From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565031
7.09845From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000002.Unknown.WBbt:0007833.SRP042651.SRX565028
WBls:000000413.0592From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
6.5296From_analysisRNASeq.brenneri.WBls:0000004.control_mean
RNASeq.brenneri.WBls:0000004.control_median
WBls:000002414.7239From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
14.8721From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
14.9481From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
15.8969From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
19.77From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
0From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
WBls:00000384.99724From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
5.47508From_analysisRNASeq.brenneri.WBls:0000038.control_mean
RNASeq.brenneri.WBls:0000038.control_median
5.95293From_analysisRNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
WBls:0000041 (16)
WBls:00001013.69467From_analysisRNASeq.brenneri.total_over_all_stages.control_median
6.57442From_analysisRNASeq.brenneri.total_over_all_stages.control_mean
Ortholog (29)
ParalogWBGene00161244Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
GeneACeDB-Compara
WBGene00139131Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00139373Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153346Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00153413Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00154000Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164684Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00191386Caenorhabditis brenneriFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: RNA-polymerase II-associated protein 3-like, C-terminal domain; Tetratricopeptide repeat; Potential Monad-binding region of RPAP3; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans rpap-3.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBN30739
Corresponding_transcriptCBN30739.1
Other_sequenceCBC02458_1
Experimental_infoMicroarray_resultsGPL14142_CBN22519_767-826_0.926_2_A
MethodGene