WormBase Tree Display for Gene: WBGene00164684

WBGene00164684 SMap: S_parent: Sequence: Cbre_Contig20
  Identity: Version: 2
    Name: CGC_name: Cbn-sgt-1.1 From_analysis: Inferred_from_orthology
      Sequence_name: CBN25959
      Molecular_name: CBN25959
        CBN25959.1
        CN28547
      Public_name: Cbn-sgt-1.1
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-sgt-1.1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sgt
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 139.959 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        69.9795 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 132.056 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        136.338 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        60.5267 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        64.4885 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        65.3613 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
      WBls:0000038 174.814 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        180.717 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        186.621 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
      WBls:0000041 (17)
      WBls:0000101 106.562 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        84.2442 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (35)
    Paralog: WBGene00142288 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00152800 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00154000 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139131 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00139373 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153346 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153413 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00161244 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00191386 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00192704 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Homodimerisation domain of SGTA; Tetratricopeptide repeat; Tetratricopeptide repeat 1; SGTA, homodimerisation domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans sgt-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN25959
    Corresponding_CDS_history: CBN25959:np197
    Corresponding_transcript: CBN25959.1
    Other_sequence (32)
  Experimental_info: Microarray_results: GPL14142_CBN15275_906-965_0.950_1_A
  Method: Gene