WormBase Tree Display for Gene: WBGene00161244

WBGene00161244 SMap: S_parent: Sequence: Cbre_Contig92
  Identity: Version: 2
    Name: CGC_name: Cbn-rpap-3 From_analysis: Inferred_from_orthology
      Sequence_name: CBN22519
      Molecular_name: CBN22519
        CBN22519.1
        CN24199
      Public_name: Cbn-rpap-3
    Species: Caenorhabditis brenneri
    History: Version_change: 1 01 Oct 2008 13:29:52 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Cbn-rpap-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpap
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 19.0579 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        9.52895 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 17.9721 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
        19.2686 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        23.0704 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        24.6585 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        29.6169 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
      WBls:0000038 10.0308 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        8.94153 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
        9.48617 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
      WBls:0000041 (16)
      WBls:0000101 5.29741 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        7.00392 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (29)
    Paralog: WBGene00154811 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00158260 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00192704 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139131 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00139373 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153346 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153413 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00154000 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00164684 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00191386 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: RNA-polymerase II-associated protein 3-like, C-terminal domain; Tetratricopeptide repeat; Potential Monad-binding region of RPAP3; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans rpap-3. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN22519
    Corresponding_transcript: CBN22519.1
    Other_sequence: CRC12151_1
  Method: Gene