WormBase Tree Display for Gene: WBGene00154000

WBGene00154000 SMap: S_parent: Sequence: Cbre_Contig516
  Identity: Version: 2
    Name: CGC_name: Cbn-sgt-1.2 From_analysis: Inferred_from_orthology
      Sequence_name: CBN15275
      Molecular_name: CBN15275
        CBN15275.1
        CN06492
      Other_name: CBN15275
        Cbn-sgt-1 From_analysis: Inferred_from_orthology
      Public_name: Cbn-sgt-1.2
    Species: Caenorhabditis brenneri
    History: Version_change: 1 30 Oct 2008 10:39:28 WBPerson4055 Event: Imported: from NGASP
              Name_change: CGC_name: Cbn-sgt-1
        2 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Cbn-sgt-1.2
                Other_name: Cbn-sgt-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sgt
    RNASeq_FPKM: WBls:0000002 (11)
      WBls:0000004 16.5215 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100770
        0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100769
        8.26075 From_analysis: RNASeq.brenneri.WBls:0000004.control_mean
            RNASeq.brenneri.WBls:0000004.control_median
      WBls:0000024 0 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311815
        27.8815 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311812
        34.5494 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311810
        37.0258 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311811
        72.2176 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311813
        78.5059 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311814
      WBls:0000038 13.8759 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100771
        16.7554 From_analysis: RNASeq.brenneri.WBls:0000038.control_mean
            RNASeq.brenneri.WBls:0000038.control_median
        19.635 From_analysis: RNASeq.brenneri.WBStrain00041997.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100772
      WBls:0000041 (17)
      WBls:0000101 16.5215 From_analysis: RNASeq.brenneri.total_over_all_stages.control_median
        25.4683 From_analysis: RNASeq.brenneri.total_over_all_stages.control_mean
    Ortholog (35)
    Paralog: WBGene00142288 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00152800 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00164684 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
            GeneACeDB-Compara
      WBGene00139131 Caenorhabditis brenneri From_analysis: WormBase-Compara
            GeneACeDB-Compara
      WBGene00139373 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153346 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00153413 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00161244 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00191386 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00192704 Caenorhabditis brenneri From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Homodimerisation domain of SGTA; Tetratricopeptide repeat; Tetratricopeptide repeat 1; SGTA, homodimerisation domain; and Tetratricopeptide-like helical domain superfamily. Is an ortholog of C. elegans sgt-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBN15275
    Corresponding_transcript: CBN15275.1
    Other_sequence (58)
  Method: Gene