WormBase Tree Display for Gene: WBGene00071742

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WBGene00071742	SMap	S_parent	Sequence	Crem_Contig366
	Identity	Version	2
		Name	Sequence_name	CRE25942
			Molecular_name	CRE25942
				CRE25942.1
				RP11491
			Other_name	cr01.sctg276.wum.4
			Public_name	CRE25942
		Species	Caenorhabditis remanei
		History	Version_change	1	09 Nov 2007 10:19:29	WBPerson1847	Event	Created
				2	03 Jul 2008 11:46:33	WBPerson4055	Event	Imported	from NGASP
							Name_change	Sequence_name	CRE25942
								Other_name	cr01.sctg276.wum.4
		Status	Live
	Gene_info	Biotype	SO:0001217
		RNASeq_FPKM	WBls:0000004	23.3098	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
				26.8864	From_analysis	RNASeq.remanei.WBls:0000004.control_mean
						RNASeq.remanei.WBls:0000004.control_median
				30.463	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
			WBls:0000024	0.098173	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747482
				0.125634	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510993
				0.13389	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747481
				0.1533	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510989
				0.161674	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747483
				0.23952	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747479
				0.383841	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510999
				1.33703	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311802
				0	From_analysis	RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747480
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747484
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747485
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747486
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747487
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747488
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747489
						RNASeq.remanei.WBStrain00031117.WBls:0000024.Unknown.WBbt:0007833.SRP049403.SRX747490
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510986
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510987
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510988
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510990
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510991
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510992
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510994
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510995
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510996
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510997
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX510998
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511000
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511001
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511002
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511003
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511004
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511005
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511006
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511007
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511008
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511009
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511010
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511011
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511012
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511013
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511014
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511015
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511016
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511017
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511018
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511019
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511020
						RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP040962.SRX511021
				3.63169	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311799
				3.81188	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311801
				3.86025	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311798
				5.39239	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000024.Unknown.WBbt:0007833.SRP026198.SRX311800
			WBls:0000027	0.080289	From_analysis	RNASeq.remanei.WBls:0000027.control_median
				0.124064	From_analysis	RNASeq.remanei.WBls:0000027.control_mean
				0.160578	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
				0.33568	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
				0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
						RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
			WBls:0000038	0.812991	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
				3.38205	From_analysis	RNASeq.remanei.WBls:0000038.control_mean
				3.74044	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
						RNASeq.remanei.WBls:0000038.control_median
				5.59271	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
			WBls:0000041	10.0205	From_analysis	RNASeq.remanei.WBls:0000041.control_median
				11.752	From_analysis	RNASeq.remanei.WBls:0000041.control_mean
				14.4456	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
				19.1022	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
				21.2236	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
				4.94019	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
				5.2052	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
				5.59545	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
			WBls:0000063	0	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101892
				2.277	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101889
				2.85728	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101887
				3.23384	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101891
				3.95275	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101894
				4.45422	From_analysis	RNASeq.remanei.WBls:0000063.control_median
				4.46127	From_analysis	RNASeq.remanei.WBls:0000063.control_mean
				4.95568	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101886
				5.13504	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101890
				6.42271	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101893
				7.27788	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Male.WBbt:0007833.SRP006033.SRX101895
				8.50047	From_analysis	RNASeq.remanei.WBStrain00042077.WBls:0000063.Female.WBbt:0007833.SRP006033.SRX101888
			WBls:0000101	4.94794	From_analysis	RNASeq.remanei.total_over_all_stages.control_median
				6.90539	From_analysis	RNASeq.remanei.total_over_all_stages.control_mean
		Ortholog	WBGene00008352	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00008618	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00008632	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00010018	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00013610	Caenorhabditis elegans	From_analysis	TreeFam
			WBGene00013838	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00016525	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00016527	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00017962	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00018690	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00018803	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00020637	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00020638	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00020639	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00021864	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022321	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022324	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022325	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022332	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022333	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022477	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022478	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022484	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00022485	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00044402	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00044672	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00044676	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00194735	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00206486	Caenorhabditis elegans	From_analysis	Inparanoid_8
			WBGene00139490	Caenorhabditis brenneri	From_analysis	OMA
			WBGene00147895	Caenorhabditis brenneri	From_analysis	TreeFam
			WBGene00159144	Caenorhabditis brenneri	From_analysis	TreeFam
			WBGene00145258	Caenorhabditis brenneri	From_analysis	TreeFam
			Csp5_scaffold_01563.g21721	Caenorhabditis sinica	From_analysis	WormBase-Compara
		Paralog	WBGene00054239	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00056642	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00056948	Caenorhabditis remanei	From_analysis	TreeFam
						GeneACeDB-Compara
			WBGene00057037	Caenorhabditis remanei	From_analysis	TreeFam
						GeneACeDB-Compara
			WBGene00057038	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00057039	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00057041	Caenorhabditis remanei	From_analysis	TreeFam
						GeneACeDB-Compara
			WBGene00057801	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00057810	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00061924	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00065929	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00065930	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00066116	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00066678	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00067999	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00069043	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069273	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069860	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00069861	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00069862	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069863	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069864	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00069866	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00069867	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069868	Caenorhabditis remanei	From_analysis	TreeFam
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069869	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069870	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00069871	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00071740	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00071741	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00080377	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00071824	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00072093	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00083110	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00083111	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00086036	Caenorhabditis remanei	From_analysis	TreeFam
						GeneACeDB-Compara
			WBGene00071744	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00073220	Caenorhabditis remanei	From_analysis	TreeFam
			WBGene00083112	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00071932	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00071745	Caenorhabditis remanei	From_analysis	TreeFam
						Inparanoid_8
						GeneACeDB-Compara
			WBGene00080370	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00083113	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00071743	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00080374	Caenorhabditis remanei	From_analysis	Inparanoid_8
						WormBase-Compara
						GeneACeDB-Compara
			WBGene00071747	Caenorhabditis remanei	From_analysis	Inparanoid_8
			WBGene00069865	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00080361	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00083109	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
			WBGene00085080	Caenorhabditis remanei	From_analysis	WormBase-Compara
						GeneACeDB-Compara
		Structured_description	Automated_description	Is predicted to encode a protein with the following domains: F-box domain; F-box A protein FB155/FB224; Mos1 transposase, HTH domain; and HTH domain in Mos1 transposase. Is an ortholog of C. elegans fbxa-24; fbxa-72; and fbxa-69.	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Molecular_info	Corresponding_CDS	CRE25942
		Corresponding_transcript	CRE25942.1
		Other_sequence	CR10394
			CR08976
			Tcol_isotig23972
			HBC01127_1
			CBC02506_1
			AM261318.1
			CRC02914_1
			GR977529.1
			FC545616.1
			OOC00299_1
			EX546799.1
			FC545594.1
			TX01283
			AM261317.1
			HBC04374_1
			FC550285.1
			TX00486
			FK803680.1
			HCC00197_3
			SC00015
			HC06493
			ACC06939_1
			PTC00939_1
			Hbac_contig00357
			GW411895.1
			CRC03896_1
			PPC21331_1
			TX00485
			PT01357
			PPC00396_1
			FK800479.1
			CRC09329_1
			FG979133.1
			HC05793
			GR978169.1
			CJC00087_2
			CR02779
			HC02382
			ACC01241_2
			HC05794
			CBC05362_1
			AM261309.1
			AM261303.1
			EY466288.1
			PPC04931_1
			PPC00396_2
			PSC00957_1
			Acan_isotig00227
			HO243976.1
			HC05792
			FC549452.1
			HCC00968_1
			HC00680
			EY470022.1
			AM261304.1
			HCC00197_1
			TCC00644_1
			CR03107
			FC554268.1
			TX01153
			AM261310.1
			HCC00197_7
			FE915042.1
			AM261316.1
			AM261307.1
			NBC00851_1
			Acan_isotig00229
			AM261315.1
			AM261313.1
			NB10786
			TCC01354_1
			ES411557.1
			ACC01318_1
			Oden_isotig14421
			FC544388.1
			Tcol_isotig00075
			CJC00561_1
			Tcol_isotig15112
			HC06481
			HCC00197_5
			AM261312.1
			Name_isotig03201
			AM261305.1
			TX00592
			Oden_isotig14420
			AM261314.1
			PP00489
			AM261308.1
	Method	Gene