WormBase Tree Display for Gene: WBGene00044672
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| WBGene00044672 | SMap | S_parent | Sequence | F42G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-4 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F42G2.8 | ||||||||
| Molecular_name | F42G2.8 | ||||||||
| F42G2.8.1 | |||||||||
| CE39369 | |||||||||
| Other_name | CELE_F42G2.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxa-4 | ||||||||
| DB_info | Database | WormFlux | gene | WBGene00044672 | |||||
| NDB | locus_tag | CELE_F42G2.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00044672|UniProtKB=G4SG25 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 4363036 | |||||||
| RefSeq | protein | NM_001393018.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | G4SG25 | |||||||
| UniProt_GCRP | UniProtAcc | G4SG25 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 17 Nov 2005 15:50:35 | WBPerson1849 | Event | Created | |||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (113) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (55) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Enriched in RIM; arc ant V; and intestine based on tiling array; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including antimycin; R24; and Cry5B based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42G2.8 | |||||||
| Corresponding_transcript | F42G2.8.1 | ||||||||
| Associated_feature | WBsf649928 | ||||||||
| WBsf665397 | |||||||||
| WBsf222765 | |||||||||
| Experimental_info | Expr_pattern | Expr1013433 | |||||||
| Expr1150984 | |||||||||
| Expr2011551 | |||||||||
| Expr2029789 | |||||||||
| Drives_construct | WBCnstr00023410 | ||||||||
| Construct_product | WBCnstr00023410 | ||||||||
| Microarray_results | A_12_P142810 | ||||||||
| A_12_P142811 | |||||||||
| GPL14144_F42G2.8_272-331_0.775_54_A | |||||||||
| GPL19516_CGZ0021293 | |||||||||
| GPL21109_F42G2.8 | |||||||||
| GPL8304_CE_WBGene00044672_A | |||||||||
| GPL8673_F42G2_8P00096 | |||||||||
| GPL8673_F42G2_8P00323 | |||||||||
| GPL8673_F42G2_8P00784 | |||||||||
| Expression_cluster (97) | |||||||||
| Map_info | Map | II | Position | -13.8267 | Error | 0.001002 | |||
| Positive | Positive_clone | F42G2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
