WormBase Tree Display for Gene: WBGene00022321
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| WBGene00022321 | SMap | S_parent | Sequence | Y82E9BL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-25 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y82E9BL.4 | ||||||||
| Molecular_name | Y82E9BL.4 | ||||||||
| Y82E9BL.4.1 | |||||||||
| CE54170 | |||||||||
| Other_name | CELE_Y82E9BL.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-25 | ||||||||
| DB_info | Database | AceView | gene | 3C438 | |||||
| WormQTL | gene | WBGene00022321 | |||||||
| WormFlux | gene | WBGene00022321 | |||||||
| NDB | locus_tag | CELE_Y82E9BL.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022321|UniProtKB=Q95XB2 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 190753 | |||||||
| RefSeq | protein | NM_001381729.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q95XB2 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XB2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-25 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (49) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (219) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-16; daf-12; and hsf-1 based on microarray and RNA-seq studies. Is affected by cadmium and Atrazine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; F-box-like domain superfamily; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y82E9BL.4 | |||||||
| Corresponding_CDS_history | Y82E9BL.4:wp275 | ||||||||
| Corresponding_transcript | Y82E9BL.4.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020028 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058575 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021688 | ||||||||
| Expr1161985 | |||||||||
| Expr2011533 | |||||||||
| Drives_construct | WBCnstr00024285 | ||||||||
| Construct_product | WBCnstr00024285 | ||||||||
| Microarray_results | SMD_Y119D3_465.F | ||||||||
| GPL14144_Y82E9BL.4_159-218_0.868_17_A | |||||||||
| GPL19516_CGZ0055185 | |||||||||
| GPL21109_Y82E9BL.4 | |||||||||
| GPL3518_CE27546 | |||||||||
| GPL8673_Y82E9BL_4P00048 | |||||||||
| GPL8673_Y82E9BL_4P00226 | |||||||||
| GPL9450_Y82E9BL.4 | |||||||||
| cea2.i.22576 | |||||||||
| Expression_cluster (70) | |||||||||
| Map_info | Map | III | Position | -22.0103 | Error | 0.021517 | |||
| Positive | Positive_clone | Y82E9BL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
