WormBase Tree Display for Gene: WBGene00002272

WBGene00002272 SMap: S_parent: Sequence: C16H3
  Identity: Version: 1
    Name: CGC_name: lec-9
      Sequence_name: C16H3.2
      Molecular_name: C16H3.2
        C16H3.2.1
        CE08236
      Other_name: CELE_C16H3.2 Accession_evidence: NDB BX284606
      Public_name: lec-9
    DB_info: Database: AceView gene XS215
        WormQTL gene WBGene00002272
        WormFlux gene WBGene00002272
        NDB locus_tag CELE_C16H3.2
        Panther gene CAEEL|WormBase=WBGene00002272|UniProtKB=G5EC10
          family PTHR11346
        NCBI gene 181786
        RefSeq protein NM_078443.9
        TrEMBL UniProtAcc G5EC10
        UniProt_GCRP UniProtAcc G5EC10
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:27 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lec
    Allele (18)
    Legacy_information: [Arata Y] No mutants known. Encodes predicted galectin. Predicted gene C16H3.2
    RNASeq_FPKM (74)
    GO_annotation (6)
    Ortholog (39)
    Paralog: WBGene00002264 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002265 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002266 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002267 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002268 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002269 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002270 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002271 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00206478 Caenorhabditis elegans From_analysis: Panther
      WBGene00002273 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00002274 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017080 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008284 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018254 Caenorhabditis elegans From_analysis: Panther
      WBGene00018255 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018649 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009748 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004165 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009747 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009751 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018651 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007768 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009746 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00235368 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011390 Caenorhabditis elegans From_analysis: Panther
      WBGene00018650 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: lec-9 encodes a predicted lectin that affects embryonic viability. Paper_evidence: WBPaper00004651
          Curator_confirmed: WBPerson48
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables glycolipid binding activity. Located in cytoplasm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C16H3.2
    Corresponding_transcript: C16H3.2.1
    Other_sequence (12)
    Associated_feature: WBsf648884
      WBsf655156
      WBsf663750
      WBsf663751
      WBsf718848
      WBsf1008966
  Experimental_info: RNAi_result: WBRNAi00028981 Inferred_automatically: RNAi_primary
      WBRNAi00010876 Inferred_automatically: RNAi_primary
      WBRNAi00001288 Inferred_automatically: RNAi_primary
      WBRNAi00040748 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011910
      Expr1031339
      Expr1144789
      Expr2013042
      Expr2031274
    Drives_construct: WBCnstr00036341
    Construct_product: WBCnstr00036341
    Microarray_results (20)
    Expression_cluster (254)
    Interaction (29)
  Map_info: Map: X Position: 24.5266 Error: 0.040461
    Positive: Positive_clone: C16H3 Person_evidence: WBPerson763
          Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00004651
    WBPaper00006465
    WBPaper00032075
    WBPaper00034766
    WBPaper00037859
    WBPaper00038491
    WBPaper00039111
    WBPaper00055090
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene