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WormBase Tree Display for Gene: WBGene00019530

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Name Class

WBGene00019530SMapS_parentSequenceK08D10
IdentityVersion2
NameCGC_namescrm-8Paper_evidenceWBPaper00029228
Person_evidenceWBPerson1606
Sequence_nameK08D10.7
Molecular_nameK08D10.7
K08D10.7.1
CE07359
Other_nameCELE_K08D10.7Accession_evidenceNDBBX284604
Public_namescrm-8
DB_infoDatabaseAceViewgene4E931
WormQTLgeneWBGene00019530
WormFluxgeneWBGene00019530
NDBlocus_tagCELE_K08D10.7
PanthergeneCAEEL|WormBase=WBGene00019530|UniProtKB=Q21319
familyPTHR23248
NCBIgene187152
RefSeqproteinNM_068100.5
TREEFAMTREEFAM_IDTF314939
TrEMBLUniProtAccQ21319
UniProt_GCRPUniProtAccQ21319
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
203 May 2007 10:33:07WBPerson2970Name_changeCGC_namescrm-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classscrm
Allele (45)
StrainWBStrain00032935
RNASeq_FPKM (74)
GO_annotation00071276
00071277
00071278
00071279
00071280
00071281
00124366
00124367
Ortholog (24)
ParalogWBGene00008681Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009753Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00011935Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00013052Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00014200Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00015437Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019531Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00235369Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionscrm-8 encodes a putative phospholipid scramblase required for normallyshort lifespan; SCRM-8 is homologous to human PLSCR1-5, and paralogousto other C. elegans SCRMs (e.g., SCRM-1).Paper_evidenceWBPaper00004911
WBPaper00012809
WBPaper00013208
WBPaper00013590
WBPaper00026643
WBPaper00029228
Curator_confirmedWBPerson567
Date_last_updated16 May 2007 00:00:00
Automated_descriptionPredicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be located in plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK08D10.7
Corresponding_transcriptK08D10.7.1
Associated_featureWBsf660073
WBsf996194
WBsf228164
Experimental_infoRNAi_resultWBRNAi00065307Inferred_automaticallyRNAi_primary
WBRNAi00016788Inferred_automaticallyRNAi_primary
WBRNAi00034121Inferred_automaticallyRNAi_primary
WBRNAi00050258Inferred_automaticallyRNAi_primary
WBRNAi00097543Inferred_automaticallyRNAi_primary
Expr_patternExpr1027024
Expr1153954
Expr2033888
Drives_constructWBCnstr00025777
Construct_productWBCnstr00025777
Microarray_results (18)
Expression_clusterWBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00041071:spe-44_downregulated
WBPaper00041954:ethanol_upregulated
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_upregulated
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Spermatogenic
WBPaper00045809:rsd-2(yp10)_downregulated
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:csr-1(RNAi)_upregulated_Set2
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00048611:MnCl2_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00050231:male_enriched
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053599:female_vs_male_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055648:sperm_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056161:male_enriched_siRNA
WBPaper00056284:ints-1(RNAi)_upregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:flcn-1(ok975)_downregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00060921:cat-2(e1112)_downregulated
WBPaper00060921:tbh-1(ok1196)_downregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061479:hda-1(ne4747)_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:mep-1(ne4629)_upregulated
WBPaper00061479:prg-1(tm872)_upregulated
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:C34B2.3_17388-T01C3.5
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066093:E.coli-purE_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066118:cyclobutrifluram_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_15
WBPaper00025099:MA_specific
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00027111:rde-3(r459)_downregulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc6390]:spermatogenesis-enriched
Interaction (77)
Map_info (3)
ReferenceWBPaper00029228
WBPaper00030738
WBPaper00042257
WBPaper00055090
WBPaper00063045
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene