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WormBase Tree Display for Gene: WBGene00010277

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Name Class

WBGene00010277SMapS_parentSequenceF58G6
IdentityVersion1
Name (4)
DB_infoDatabaseAceViewgene4K419
WormQTLgeneWBGene00010277
WormFluxgeneWBGene00010277
NDBlocus_tagCELE_F58G6.7
PanthergeneCAEEL|WormBase=WBGene00010277|UniProtKB=Q95QD9
familyPTHR12483
NCBIgene177798
RefSeqproteinNM_069313.7
TREEFAMTREEFAM_IDTF315142
TrEMBLUniProtAccQ95QD9
UniProt_GCRPUniProtAccQ95QD9
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:51WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (26)
RNASeq_FPKM (74)
GO_annotation00088369
00088370
00088371
00088372
00088373
00088374
00117707
00117708
00117709
Contained_in_operonCEOP4332
Ortholog (21)
ParalogWBGene00010274Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017170Caenorhabditis elegansFrom_analysisPanther
WBGene00017954Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017852Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00021975Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045053Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00044107Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019674Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045052Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable copper ion transmembrane transporter activity. Predicted to be involved in copper ion transmembrane transport. Predicted to be located in late endosome membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF58G6.7
Corresponding_transcriptF58G6.7.1
Other_sequenceOden_isotig11145
Oden_isotig11144
HC08289
Oden_isotig11143
HC01972
Associated_featureWBsf997457
WBsf1017987
WBsf228855
WBsf228856
Experimental_infoRNAi_resultWBRNAi00016020Inferred_automaticallyRNAi_primary
WBRNAi00049058Inferred_automaticallyRNAi_primary
WBRNAi00049063Inferred_automaticallyRNAi_primary
Expr_patternExpr1013850
Expr1152803
Expr2004419
Expr2022642
Drives_constructWBCnstr00031535
Construct_productWBCnstr00031535
Microarray_results (20)
Expression_clusterWBPaper00032528:L3_enriched
WBPaper00033065:clk-1(qm30)_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_embryo_SelectivelyEnriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_downregulated
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00040209:B.thuringiensis_downregulated_MY15
WBPaper00040209:B.thuringiensis_downregulated_N2
WBPaper00040412:germline-regulated_daf-12_target
WBPaper00040560:hpl-2_L3_downregulated
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045521:Gender_Neutral
WBPaper00045774:clk-1_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00046509:htz-1(ok3099)_downregulated
WBPaper00046509:lin-35(n745)_downregulated
WBPaper00047131:daf-2(e1370)_downregulated_N2-background
WBPaper00048988:neuron_expressed
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049484:elt-2(RNAi)_downregulated_L1
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049545:cco-1(RNAi)_upregulated
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049732:blmp-1(tm548)_vs_N2_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050412:cco-1(RNAi)_upregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:stavudine_72h_regulated
WBPaper00053302:zidovudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055060:flr-1(RNAi)_upregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:atfs-1(gk3094)_downregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_downregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_20C_downregulated
WBPaper00056275:P.aeruginosa_downregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056617:adr-1_upregulated_embryo_transcript
WBPaper00056731:human-amylin_downregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00058948:PA14_upregulated
WBPaper00058969:RIS_depleted
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059334:sacy-1(depletion)_regulated
WBPaper00059421:daf-3(mgDf90)_upregulated
WBPaper00059604:fluvastatin_upregulated_dlk-1(km12)
WBPaper00059735:glucose_downregulated_N2
WBPaper00059739:hira-1(gk835598)_downregulated_adult
WBPaper00059739:hira-1(gk835598)_downregulated_L1
WBPaper00059739:hira-1(gk835598)_downregulated_L4
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_downregulated
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060764:swsn-1(os22ts)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060909:atfs-1(et18)_upregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:HB115_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061045:Y56A3A.22(cck200)_upregulated
WBPaper00061106:endu-2(tm4977)_upregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061530:nhr-49(e2144)_downregulated
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_downregulated
WBPaper00061699:daf-18(ok480)_upregulated
WBPaper00061952:daf-18(yh1)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_downregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062354:H.zoospora_12h_regulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062590:Aging_downregulated_body-wall-muscle
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062684:pathogen_downregulated_N2
WBPaper00064005:starvation_upregulated_aptf-1(gk794)_mRNA
WBPaper00064005:starvation_upregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064494:postdauer_downregulated_AWA
WBPaper00064632:daf-2(e1370)_downregulated_intestine
WBPaper00064661:lpd-3(ok2138)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00064871:hypoxia_upregulated_F2
WBPaper00065029:cadmium_downregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065373:sek-1(km4)_downregulated_Ref
WBPaper00065392:Lb.delbrueckii_upregulated
WBPaper00065392:Lb.gasseri_upregulated
WBPaper00065392:Lb.plantarum_upregulated
WBPaper00065392:Lb.reuteri_upregulated
WBPaper00065392:Lb.rhamnosus_upregulated
WBPaper00065392:P.pentosaceus_upregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066038:mip-1(how5)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4386_cluster_2_5
cgc4489_group_4
WBPaper00026980:intestine_enriched
WBPaper00027722:Microbacterium_nematophilum_downregulated
WBPaper00028789:PA14_vs_gacA_downregulated_4hr
WBPaper00028789:PA14_vs_gacA_downregulated_8hr
WBPaper00028789:PA14_vs_OP50_downregulated_4hr
WBPaper00028789:PA14_vs_OP50_downregulated_8hr
WBPaper00030985:Enterococcus_faecalis_upregulated
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031703:heme_responsive_1
WBPaper00035479:daf-16(RNAi)_upregulated
WBPaper00035873:osm-11_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_C
WBPaper00036383:ash-2_Day8_regulated
WBPaper00036383:ash-2_L3_regulated
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00037695:WC_5-day
WBPaper00038172:tax-6null_down_regulated
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00038462:aging_downregulated
WBPaper00039851:HK_C_albicans_vs_HK_OP50
WBPaper00039851:Live_C_albicans_vs_HK_OP50
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00040184:hcf-1down_sir-2.1down_daf-2down
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040876:mir-35_downregulated
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041211:RPW-24_Down
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045015:nhr-25(RNAi)_downregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
WBPaper00056330:mrps-5(RNAi)_upregulated
WBPaper00057098:SiO2-nanoparticles_downregulated
[cgc5376]:let-60(G12V)-regulated_genes
[cgc6390]:Cluster_C
InteractionWBInteraction000032169
WBInteraction000565082
WBInteraction000565111
Map_infoPositivePositive_cloneF58G6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV4.34767
MethodGene