WormBase Tree Display for Gene: WBGene00019531

WBGene00019531 SMap: S_parent: Sequence: K08D10
  Identity: Version: 2
    Name: CGC_name: scrm-5 Paper_evidence: WBPaper00029228
          Person_evidence: WBPerson1606
      Sequence_name: K08D10.8
      Molecular_name: K08D10.8
        K08D10.8.1
        CE07360
        K08D10.8.2
      Other_name: CELE_K08D10.8 Accession_evidence: NDB BX284604
      Public_name: scrm-5
    DB_info: Database: AceView gene 4E929
        WormQTL gene WBGene00019531
        WormFlux gene WBGene00019531
        NDB locus_tag CELE_K08D10.8
        Panther gene CAEEL|WormBase=WBGene00019531|UniProtKB=Q21318
          family PTHR23248
        NCBI gene 177180
        RefSeq protein NM_068099.7
        TREEFAM TREEFAM_ID TF314939
        TrEMBL UniProtAcc Q21318
        UniProt_GCRP UniProtAcc Q21318
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:01 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 03 May 2007 10:33:07 WBPerson2970 Name_change: CGC_name: scrm-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: scrm
    Allele: WBVar00903151
      WBVar00903152
      WBVar00903153
      WBVar00903154
      WBVar00604169
      WBVar00903155
      WBVar00903156
      WBVar02123921
      WBVar00903157
      WBVar00903158
      WBVar00903159
      WBVar00903160
      WBVar00903161
      WBVar00903162
      WBVar00903163
      WBVar02124114
      WBVar00091098
      WBVar00422807
      WBVar00422808
      WBVar00422809
      WBVar00422810
      WBVar00422811
      WBVar00422812
      WBVar00422813
      WBVar02124696
      WBVar02121201
      WBVar02121023
      WBVar02121770
      WBVar02122139
      WBVar02123244
      WBVar02120501
      WBVar02123081
      WBVar01499790
      WBVar02151700
      WBVar02121616
      WBVar02124013
      WBVar02124199
      WBVar01499633
      WBVar02124587
      WBVar02122391
      WBVar02124792
      WBVar02122954
      WBVar00091216
      WBVar02122592
      WBVar00253200
    RNASeq_FPKM (74)
    GO_annotation: 00071271
      00071272
      00071273
      00071274
      00071275
      00124368
      00124369
    Ortholog (24)
    Paralog: WBGene00008681 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00009752 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
      WBGene00009753 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00011935 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00013052 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00014200 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015437 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019530 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00235369 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: scrm-5 encodes a putative phospholipid scramblase homologous to humanPLSCR1-5, and paralogous to other C. elegans SCRMs (e.g., SCRM-1);scrm-5(RNAi) animals have no obvious phenotype. Paper_evidence: WBPaper00004911
            WBPaper00012809
            WBPaper00013208
            WBPaper00013590
            WBPaper00029228
          Curator_confirmed: WBPerson567
          Date_last_updated: 16 May 2007 00:00:00
      Automated_description: Predicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be located in plasma membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K08D10.8
    Corresponding_transcript: K08D10.8.1
      K08D10.8.2
    Associated_feature: WBsf660072
      WBsf228163
  Experimental_info: RNAi_result: WBRNAi00034122 Inferred_automatically: RNAi_primary
      WBRNAi00050259 Inferred_automatically: RNAi_primary
      WBRNAi00097542 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1038439
      Expr1153955
      Expr2015654
      Expr2033886
    Drives_construct: WBCnstr00025776
    Construct_product: WBCnstr00025776
    Microarray_results (14)
    Expression_cluster (158)
    Interaction (116)
  Map_info (3)
  Reference: WBPaper00029228
    WBPaper00030738
    WBPaper00042257
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene