WormBase Tree Display for Gene: WBGene00006750

WBGene00006750 SMap: S_parent: Sequence: T10A3
  Identity: Version: 1
    Name: CGC_name: unc-10 Person_evidence: WBPerson261
      Sequence_name: T10A3.1
      Molecular_name (18)
      Other_name: rim-1
        Rim Paper_evidence: WBPaper00013595
        CELE_T10A3.1 Accession_evidence: NDB BX284606
      Public_name: unc-10
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    Reference_allele: WBVar00142961
    Allele: WBVar00000036 Inferred_automatically: From strain object: DA591
      WBVar00142980
      WBVar00054232
      WBVar00088822
      WBVar02158529
      WBVar02158667
      WBVar02159347
      WBVar00088829
      WBVar01945653
      WBVar01487192
      WBVar00599134
      WBVar01825236
      WBVar00080358
      WBVar00047961
      WBVar00302873
      WBVar01489593
      WBVar00080361
      WBVar00088121
      WBVar00047966
      WBVar00088123
      WBVar00088859
      WBVar00088860
      WBVar00047971
      WBVar00047976
      WBVar00047981
      WBVar01490916
      WBVar01499933
      WBVar01159733
      WBVar01499934
      WBVar02046539
      WBVar01159734
      WBVar01159735
      WBVar01159736
      WBVar01159737
      WBVar02064708
      WBVar01159738
      WBVar02064709
      WBVar01159739
      WBVar01159740
      WBVar01159741
      WBVar01159742
      WBVar01159743
      WBVar01499760
      WBVar01499761
      WBVar01159744
      WBVar01159745
      WBVar01159746
      WBVar01159747
      WBVar01849056
      WBVar02045052
      WBVar01159748
      WBVar01159749
      WBVar01159750
      WBVar01159751
      WBVar01159752
      WBVar01159753
      WBVar01159754
      WBVar01159755
      WBVar01159756
      WBVar01159757
      WBVar01159758
      WBVar00142961
      WBVar01159759
      WBVar01159760
      WBVar01159761
      WBVar01159762
      WBVar01159763
      WBVar01159764
      WBVar01159765
      WBVar01159766
      WBVar01159767
      WBVar01159768
      WBVar01159769
      WBVar01159770
      WBVar01159771
      WBVar01159772
      WBVar01159773
      WBVar01159774
      WBVar01159775
      WBVar01159776
      WBVar01159777
      WBVar01159778
      WBVar01159779
      WBVar01159780
      WBVar01159781
      WBVar01159782
      WBVar01159783
      WBVar01159784
      WBVar01159785
      WBVar01159786
      WBVar01159787
      WBVar01159788
      WBVar01159789
      WBVar01159790
      WBVar01159791
      WBVar00508073
      WBVar01159792
      WBVar00508074
      WBVar01159793
      WBVar01815932
      WBVar01815933
      WBVar01159794
      WBVar00508075
      WBVar01758721
      WBVar01758722
      WBVar01159795
      WBVar00508076
      WBVar01159796
      WBVar00508077
      WBVar00508078
      WBVar01159797
      WBVar00508079
      WBVar01159798
      WBVar01159799
      WBVar00508080
      WBVar01159800
      WBVar00508081
      WBVar01159801
      WBVar00508082
      WBVar00508083
      WBVar02151542
      WBVar01159802
      WBVar00508084
      WBVar00508085
      WBVar00508086
      WBVar00508087
      WBVar00508088
      WBVar00508089
      WBVar00508090
      WBVar00260879
      WBVar01883226
      WBVar00508091
      WBVar01883227
      WBVar00508092
      WBVar01883228
      WBVar01883229
      WBVar01883230
      WBVar01883231
      WBVar01883232
      WBVar01883233
      WBVar01883234
      WBVar01883235
      WBVar01883236
      WBVar01883237
      WBVar00098970
      WBVar00098971
      WBVar00095004
      WBVar01499867
      WBVar00095005
      WBVar01499868
      WBVar01499685
      WBVar00088819
      WBVar01500067
    Legacy_information: e102 : weak coiler tends to back loopy movement in reverse; fairly active slightly small and thin. ES3 ME2. NA2 (e126).
      [C.elegansII] e102 : weak coiler, tends to back, loopy movement in reverse; fairly active; slightly small and thin; Ric. ES3 ME2. OA1: e126. [Brenner 1974; Nguyen et al. 1995]
      [Nonet M] unc-10(e102) was phenotypically rescued by both cosmid C34H12 and a 16 kb BamHI/KpnI subclone of this cosmid that contains effectively only the rim-1 gene. The rim-1 gene (rim for Rab Interacting Molecule) is the combined genefinder products T10A3.1 and K03A1.3 (with several mistakes in the prediction by genefinder). Furthermore, unc-10(md330) and unc-10(md1117) both contain deletions of the vast majority of the rim-1 gene. Specifically, md1117 deleted 8.6 kb that extends from approximately 500 bp 5' of the atg to 200 bp 3' of the TAA of the rim-1 gene product.
      [Nonet M] Encodes Rab-3 interacting protein.
    Strain: WBStrain00002752
      WBStrain00027194
      WBStrain00029061
      WBStrain00004100
      WBStrain00005485
      WBStrain00005508
      WBStrain00005509
      WBStrain00051853
    RNASeq_FPKM (74)
    GO_annotation (32)
    Ortholog (51)
    Structured_description: Concise_description: unc-10 encodes a protein with zinc-finger, Q/N-rich, PDZ, and C2 domains that is homologous to vertebrate Rim1, a presynaptic protein which binds, and effects the activity of, synaptic vesicle-associated GTP-Rab3; UNC-10 is required for normal locomotion and synaptic transmission, and localizes to a subdomain of presynaptic termini, where it probably acts to regulate the priming step of presynaptic vesicle fusion by promoting conformational changes in syntaxin. Paper_evidence: WBPaper00002487
            WBPaper00004891
            WBPaper00005068
            WBPaper00012788
            WBPaper00012830
            WBPaper00012882
            WBPaper00012897
            WBPaper00013003
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables small GTPase binding activity. Involved in several processes, including chemical synaptic transmission; defecation; and positive regulation of cholinergic synaptic transmission. Located in axon and presynaptic active zone. Expressed in dorsal nerve cord; nerve ring; nervous system; uv1; and ventral nerve cord. Is an ortholog of human RIMS1 (regulating synaptic membrane exocytosis 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T10A3.1a
      T10A3.1b
      T10A3.1c
      T10A3.1d
      T10A3.1e
      T10A3.1f
    Corresponding_transcript: T10A3.1a.1
      T10A3.1b.1
      T10A3.1c.1
      T10A3.1d.1
      T10A3.1e.1
      T10A3.1f.1
    Other_sequence (30)
    Associated_feature (22)
  Experimental_info: RNAi_result (19)
    Expr_pattern: Chronogram1591
      Expr2418
      Expr14780
      Expr15235
      Expr15236
      Expr1017493
      Expr1032824
      Expr1156587
      Expr2017837
      Expr2035973
    Drives_construct: WBCnstr00003280
      WBCnstr00034173
    Construct_product (11)
    Antibody: WBAntibody00000412
      WBAntibody00000866
      WBAntibody00001456
      WBAntibody00001656
      WBAntibody00001729
      WBAntibody00002171
    Microarray_results (30)
    Expression_cluster (208)
    Interaction: WBInteraction000035668
      WBInteraction000038235
      WBInteraction000049017
      WBInteraction000112791
      WBInteraction000113770
      WBInteraction000114671
      WBInteraction000126291
      WBInteraction000126343
      WBInteraction000126345
      WBInteraction000126405
      WBInteraction000126559
      WBInteraction000126635
      WBInteraction000134619
      WBInteraction000160349
      WBInteraction000166757
      WBInteraction000166866
      WBInteraction000166953
      WBInteraction000167492
      WBInteraction000173992
      WBInteraction000175570
      WBInteraction000178045
      WBInteraction000178046
      WBInteraction000178047
      WBInteraction000188216
      WBInteraction000203613
      WBInteraction000204742
      WBInteraction000204743
      WBInteraction000204744
      WBInteraction000229511
      WBInteraction000229512
      WBInteraction000229513
      WBInteraction000229514
      WBInteraction000229515
      WBInteraction000229516
      WBInteraction000232224
      WBInteraction000250100
      WBInteraction000277217
      WBInteraction000294878
      WBInteraction000299279
      WBInteraction000306028
      WBInteraction000322458
      WBInteraction000341645
      WBInteraction000341646
      WBInteraction000354905
      WBInteraction000359943
      WBInteraction000359944
      WBInteraction000361252
      WBInteraction000380125
      WBInteraction000399489
      WBInteraction000399490
      WBInteraction000410776
      WBInteraction000434105
      WBInteraction000447522
      WBInteraction000469049
      WBInteraction000471265
      WBInteraction000471266
      WBInteraction000501292
      WBInteraction000501720
      WBInteraction000502148
      WBInteraction000502149
      WBInteraction000502961
      WBInteraction000502962
      WBInteraction000520028
      WBInteraction000540982
      WBInteraction000543488
      WBInteraction000544486
      WBInteraction000544487
      WBInteraction000544604
      WBInteraction000544708
      WBInteraction000544709
      WBInteraction000555755
      WBInteraction000556685
      WBInteraction000556819
      WBInteraction000558409
      WBInteraction000560298
      WBInteraction000560299
      WBInteraction000566964
      WBInteraction000570720
      WBInteraction000574266
      WBInteraction000578488
      WBInteraction000583717
      WBInteraction000584115
  Map_info: Map: X Position: -1.7816 Error: 0.001118
    Well_ordered
    Positive: Positive_clone: C34H12
        T10A3 Person_evidence: WBPerson451
          Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 147
        182
        3912
        3913
        6198
      Multi_point (23)
      Pos_neg_data (13)
  Reference: WBPaper00000031
    WBPaper00000608
    WBPaper00001218
    WBPaper00001443
    WBPaper00001558
    WBPaper00001709
    WBPaper00002195
    WBPaper00002487
    WBPaper00002590
    WBPaper00004891
    WBPaper00005423
    WBPaper00005528
    WBPaper00005543
    WBPaper00006049
    WBPaper00010018
    WBPaper00010864
    WBPaper00011509
    WBPaper00013595
    WBPaper00013752
    WBPaper00013979
    WBPaper00014706
    WBPaper00014723
    WBPaper00014761
    WBPaper00014791
    WBPaper00015253
    WBPaper00015500
    WBPaper00015812
    WBPaper00016723
    WBPaper00017184
    WBPaper00018073
    WBPaper00019199
    WBPaper00019330
    WBPaper00022646
    WBPaper00023487
    WBPaper00023973
    WBPaper00024247
    WBPaper00024525
    WBPaper00025638
    WBPaper00026015
    WBPaper00026196
    WBPaper00026618
    WBPaper00026667
    WBPaper00026711
    WBPaper00026785
    WBPaper00026941
    WBPaper00027296
    WBPaper00027304
    WBPaper00027305
    WBPaper00027751
    WBPaper00028379
    WBPaper00028808
    WBPaper00028886
    WBPaper00030810
    WBPaper00030844
    WBPaper00030845
    WBPaper00030995
    WBPaper00031137
    WBPaper00031717
    WBPaper00032122
    WBPaper00032233
    WBPaper00032252
    WBPaper00032389
    WBPaper00034738
    WBPaper00035074
    WBPaper00035163
    WBPaper00035356
    WBPaper00035492
    WBPaper00036179
    WBPaper00037731
    WBPaper00038253
    WBPaper00038491
    WBPaper00039282
    WBPaper00041950
    WBPaper00043415
    WBPaper00043908
    WBPaper00044074
    WBPaper00045955
    WBPaper00048069
    WBPaper00048427
    WBPaper00052130
    WBPaper00052816
    WBPaper00055090
    WBPaper00055787
    WBPaper00056826
    WBPaper00057348
    WBPaper00057647
    WBPaper00057845
    WBPaper00058534
    WBPaper00059613
    WBPaper00061027
    WBPaper00061401
    WBPaper00061408
    WBPaper00061748
    WBPaper00061818
    WBPaper00062568
    WBPaper00063848
    WBPaper00063852
    WBPaper00064182
    WBPaper00064323
    WBPaper00064639
    WBPaper00064844
    WBPaper00064911
    WBPaper00064934
    WBPaper00064955
    WBPaper00065105
    WBPaper00065262
    WBPaper00065342
    WBPaper00065360
  Remark: Sequence connection from [Koushika SP, Nonet M]
    Other name from JA Hodgkin, 09/02/2002
    unc-10 is the same as rim-1 and therefore rim-1 was merged into unc-10 based on advice from JAH
  Method: Gene