WormBase Tree Display for Variation: WBVar00095004
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| WBVar00095004 | Evidence | Paper_evidence | WBPaper00004891 | ||
|---|---|---|---|---|---|
| Name | Public_name | ox110 | |||
| Other_name | CE31234:p.Gly583IlefsTer6 | ||||
| T10A3.1d.1:c.1709-7_2125del | |||||
| T10A3.1b.1:c.1747_2170del | |||||
| T10A3.1c.1:c.1715-7_2131del | |||||
| CE30169:p.Gly583IlefsTer6 | |||||
| T10A3.1e.1:c.1715-7_2131del | |||||
| T10A3.1a.1:c.1747_2170del | |||||
| T10A3.1f.1:c.1709-7_2125del | |||||
| HGVSg | CHROMOSOME_X:g.7276006_7276576del | ||||
| Sequence_details | SMap | S_parent | Sequence | T10A3 | |
| Flanking_sequences | catgctttactgaaggggtcttaccaaggg | atacttctgtcgagctgattgttagtagga | |||
| Mapping_target | T10A3 | ||||
| Type_of_mutation | Deletion | ||||
| SeqStatus | Sequenced | ||||
| Variation_type | Allele | ||||
| Origin | Species | Caenorhabditis elegans | |||
| Laboratory | EG | ||||
| Status | Live | ||||
| Affects | Gene | WBGene00006750 | |||
| Transcript | T10A3.1c.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | ||
| VEP_impact | HIGH | ||||
| HGVSc | T10A3.1c.1:c.1715-7_2131del | ||||
| cDNA_position | ?-2131 | ||||
| CDS_position | ?-2131 | ||||
| Protein_position | ?-711 | ||||
| Intron_number | 13-15/28 | ||||
| Exon_number | 14-16/29 | ||||
| T10A3.1d.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T10A3.1d.1:c.1709-7_2125del | ||||
| cDNA_position | ?-2125 | ||||
| CDS_position | ?-2125 | ||||
| Protein_position | ?-709 | ||||
| Intron_number | 13-15/27 | ||||
| Exon_number | 14-16/28 | ||||
| T10A3.1e.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T10A3.1e.1:c.1715-7_2131del | ||||
| cDNA_position | ?-2131 | ||||
| CDS_position | ?-2131 | ||||
| Protein_position | ?-711 | ||||
| Intron_number | 13-15/27 | ||||
| Exon_number | 14-16/28 | ||||
| T10A3.1b.1 (11) | |||||
| T10A3.1a.1 (11) | |||||
| T10A3.1f.1 | VEP_consequence | splice_acceptor_variant,splice_donor_variant,coding_sequence_variant,intron_variant | |||
| VEP_impact | HIGH | ||||
| HGVSc | T10A3.1f.1:c.1709-7_2125del | ||||
| cDNA_position | ?-2125 | ||||
| CDS_position | ?-2125 | ||||
| Protein_position | ?-709 | ||||
| Intron_number | 13-15/26 | ||||
| Exon_number | 14-16/27 | ||||
| Genetics | Interpolated_map_position | X | -1.78162 | ||
| Reference | WBPaper00004891 | ||||
| Method | Deletion_allele |
