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WormBase Tree Display for Variation: WBVar00080358

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Name Class

WBVar00080358EvidencePaper_evidenceWBPaper00040707
NamePublic_nameWBVar00080358
Other_namehaw104718
cewivar00274400
T10A3.1e.1:c.3599-18A>G
T10A3.1c.1:c.3914-18A>G
T10A3.1b.1:c.3953-18A>G
T10A3.1f.1:c.3593-18A>G
T10A3.1d.1:c.3908-18A>G
T10A3.1a.1:c.4001-18A>G
HGVSgCHROMOSOME_X:g.7273393T>C
Sequence_detailsSMapS_parentSequenceT10A3
Flanking_sequencestttcccttctgtaaaatatgattgaaaatttacataacatgtcatgctta
Mapping_targetT10A3
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
WBStrain00005835From_analysisWGS_Andersen
LaboratoryRW
QX
PersonWBPerson1562
WBPerson1730
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
WGS_Andersen
HistoryAcquires_mergeWBVar01469676
StatusLive
AffectsGeneWBGene00006750
TranscriptT10A3.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT10A3.1c.1:c.3914-18A>G
Intron_number24/28
T10A3.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT10A3.1d.1:c.3908-18A>G
Intron_number24/27
T10A3.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT10A3.1e.1:c.3599-18A>G
Intron_number23/27
T10A3.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT10A3.1b.1:c.3953-18A>G
Intron_number23/27
T10A3.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT10A3.1a.1:c.4001-18A>G
Intron_number23/27
T10A3.1f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT10A3.1f.1:c.3593-18A>G
Intron_number23/26
ReferenceWBPaper00040707
Remark[20081124 db] this Variation was previously named hw104718
MethodWGS_Hawaiian_Waterston