WormBase Tree Display for Gene: WBGene00010242

WBGene00010242 SMap: S_parent: Sequence: F58D5
  Identity: Version: 1
    Name: Sequence_name: F58D5.2
      Molecular_name: F58D5.2a
        F58D5.2a.1
        CE34487
        F58D5.2b
        CE34488
        F58D5.2b.1
        F58D5.2b.2
        F58D5.2b.3
        F58D5.2b.4
      Other_name: CELE_F58D5.2 Accession_evidence: NDB BX284601
      Public_name: F58D5.2
    DB_info: Database: AceView gene 1M658
        WormQTL gene WBGene00010242
        WormFlux gene WBGene00010242
        NDB locus_tag CELE_F58D5.2
        NCBI gene 173087
        RefSeq protein NM_001392955.1
            NM_001026345.3
        TrEMBL UniProtAcc Q9NLD2
            Q7YTT0
        UniProt_GCRP UniProtAcc Q9NLD2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele: WBVar01532385
      WBVar01532386
      WBVar01532387
      WBVar01532388
      WBVar01532389
      WBVar02121526
      WBVar01532390
      WBVar01532391
      WBVar00314383
      WBVar00101571
      WBVar01932735
      WBVar01932736
      WBVar01713674
      WBVar01958057
      WBVar01574199
      WBVar01574200
      WBVar01574201
      WBVar01574202
      WBVar01574203
      WBVar01574204
      WBVar01574205
      WBVar01574206
      WBVar01574207
      WBVar00347369
      WBVar01574208
      WBVar00347370
      WBVar01574209
      WBVar01499739
      WBVar01574210
      WBVar00347371
      WBVar00347372
      WBVar01574211
      WBVar00347373
      WBVar00347374
      WBVar02102604
      WBVar01663877
      WBVar00347375
      WBVar00158322
      WBVar00158323
      WBVar00158324
      WBVar00158325
      WBVar00158327
      WBVar00158328
      WBVar01499204
      WBVar00158329
      WBVar02095444
      WBVar01403681
      WBVar02097307
      WBVar01622949
      WBVar00217453
      WBVar01499055
      WBVar00217458
      WBVar01988546
      WBVar00540249
      WBVar00540250
      WBVar01347811
      WBVar01993488
      WBVar01499999
      WBVar00676531
      WBVar00676532
      WBVar00676533
      WBVar00676534
      WBVar00676535
      WBVar00676536
      WBVar00676537
      WBVar00676538
      WBVar00676539
      WBVar00676540
      WBVar00676541
      WBVar00676542
      WBVar00676543
      WBVar00676544
      WBVar00676545
      WBVar00676546
      WBVar00676547
      WBVar00676548
      WBVar00676549
      WBVar00676550
      WBVar00676551
      WBVar01476282
      WBVar01426311
      WBVar02088737
      WBVar02088738
      WBVar02088739
      WBVar01498959
      WBVar00234123
      WBVar01820987
    RNASeq_FPKM (74)
    GO_annotation: 00082602
    Ortholog (21)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58D5.2a
      F58D5.2b
    Corresponding_CDS_history: F58D5.2:wp104
    Corresponding_transcript: F58D5.2a.1
      F58D5.2b.1
      F58D5.2b.2
      F58D5.2b.3
      F58D5.2b.4
    Associated_feature (6)
  Experimental_info: RNAi_result: WBRNAi00048969 Inferred_automatically: RNAi_primary
      WBRNAi00033084 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016762
      Expr1152711
      Expr2004387
      Expr2022611
    Microarray_results (23)
    Expression_cluster: WBPaper00032479:CB4856vsN2_LifeStageProfile_Variation
      WBPaper00033065:clk-1(qm30)_upregulated
      WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037682:sma-2_downregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_downregulated_TilingArray
      WBPaper00038438:P.lumniescens_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_downregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00040209:B.thuringiensis_downregulated_MY15
      WBPaper00040209:B.thuringiensis_downregulated_MY18
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040285:H2S_12hr_upregulated
      WBPaper00042561:smg-2(RNAi)_downregulated
      WBPaper00042561:smgl-1(RNAi)_downregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00044786:emr-1(gk119)_downregulated
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045521:Gender_Neutral
      WBPaper00046121:mesoderm_unique
      WBPaper00047131:daf-2(e1370)_upregulated_hel-1(gk148684)-background
      WBPaper00048611:MnCl2_downregulated
      WBPaper00048926:miaserin_upregulated_adult-day5
      WBPaper00048988:neuron_expressed
      WBPaper00049495:starvation-refeeding_regulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051352:Long-Term-Association-Memory_upregulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053599:mitosis_vs_meiosis_upregulated
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00053713:Pheromone-induced_postdauer_vs_control_downregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00053909:N2_vs_CB4856_upregulated
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00054758:alg-1(gk204)_downregulated
      WBPaper00055013:hmg-3(bar24)_upregulated
      WBPaper00055060:flr-1(RNAi)_downregulated
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Psora_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00055648:vulva-uterus_expressed
      WBPaper00055827:pfd-6(gk493446)_downregulated
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056167:Cry5B_upregulated
      WBPaper00057041:unc-70(cas983)_downregulated
      WBPaper00057068:numr-1(RNAi)_upregulated
      WBPaper00057161:meg-3(tm4259)_meg-4(ax2026)_downregulated_endo-siRNA_targets
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00059839:S.maltophilia_regulated
      WBPaper00060459:bcat-1(RNAi)_downregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AMsh
      WBPaper00061340:Anterior_arcade_cell
      WBPaper00061340:mc2
      WBPaper00061340:Parent_of_PVP_and_rect_V
      WBPaper00061340:pm1_pm2
      WBPaper00061340:pm3_pm4_pm5
      WBPaper00061340:pm6
      WBPaper00061340:pm7
      WBPaper00061340:pm8
      WBPaper00061340:Posterior_arcade_cell
      WBPaper00061340:rect_D
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:C46C2.5_15925-F17E9.2
      WBPaper00061527:sol-1-jnk-1_18695
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00061572:oleic-acid-specific_mating_upregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062345:bortezomib_4h_downregulated_N2
      WBPaper00062446:nhr-8(hd117)_downregulated
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064532:pals-25(icb98)_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00065096:25C_vs_20C_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065158:AFD_enriched
      WBPaper00065841:11_0
      WBPaper00065841:11_1
      WBPaper00065841:11_2
      WBPaper00065841:11_3
      WBPaper00065841:43_0
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066232:ash-2(RNAi)_upregulated_WT
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00030839:Embryo_A_Class
      WBPaper00030985:Enterococcus_faecalis_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:FedUp
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035084:L2_enriched_AIN-2_IP
      WBPaper00035084:L3_enriched_AIN-2_IP
      WBPaper00035084:L4_enriched_AIN-2_IP
      WBPaper00036286:Pattern_F
      WBPaper00036375:depleted_in_PVD_OLL
      WBPaper00037695:LD_3-day
      WBPaper00037695:WC_5-day
      WBPaper00038172:tax-6null_up_regulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_old
      WBPaper00040963:Q200_down
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00042067:Cu2+_upregulated_WT
      WBPaper00042234:xpa-1_upregulated
      WBPaper00045263:nuo-6(qm200)_downregulated
      WBPaper00047070:N2_starvation_upregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:eat-2(ad465)_downregulated_in-DMSO
      WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_downregulated
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_downregulated_AdultDay2
      WBPaper00057098:SiO2-nanoparticles_upregulated
  Map_info: Positive: Positive_clone: F58D5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 13.041
  Method: Gene