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WormBase Tree Display for Variation: WBVar02088738

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Name Class

WBVar02088738NamePublic_nameWBVar02088738
Other_namecewivar00818563
F58D5.2a.1:c.357_363delinsACTTTTG
CE34487:p.GlyLeuLeuVal119=
F58D5.2b.2:c.-22_-16delinsACTTTTG
F58D5.2b.4:c.-22_-16delinsACTTTTG
F58D5.2b.3:c.-22_-16delinsACTTTTG
F58D5.2b.1:c.-22_-16delinsACTTTTG
HGVSgCHROMOSOME_I:g.12066292_12066298delinsCAAAAGT
Sequence_detailsSMapS_parentSequenceF58D5
Flanking_sequencesACAAAACACCCACATCAAGATGGCAGACACCCCACCGAAACGAGCACATACAGAAGAGCT
Mapping_targetF58D5
Source_location225CHROMOSOME_I1206628312066289From_analysisMillion_mutation_project_reanalysis
Type_of_mutationInsertionCAAAAGT
Deletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00010242
TranscriptF58D5.2b.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF58D5.2b.2:c.-22_-16delinsACTTTTG
cDNA_position228-235
Exon_number2/5
F58D5.2b.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF58D5.2b.3:c.-22_-16delinsACTTTTG
cDNA_position510-517
Exon_number2/5
F58D5.2b.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF58D5.2b.4:c.-22_-16delinsACTTTTG
cDNA_position65-72
Exon_number1/4
F58D5.2b.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScF58D5.2b.1:c.-22_-16delinsACTTTTG
cDNA_position205-212
Exon_number2/5
F58D5.2a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF58D5.2a.1:c.357_363delinsACTTTTG
HGVSpCE34487:p.GlyLeuLeuVal119=
cDNA_position781-788
CDS_position357-364
Protein_position119-122
Exon_number4/6
Codon_changeggCCTCCTTGtg/ggACTTTTGGtg
Amino_acid_changeGLLV
MethodWGS_Flibotte