WormBase Tree Display for Gene: WBGene00009259

WBGene00009259 SMap: S_parent: Sequence: F29G6
  Identity: Version: 2
    Name: CGC_name: hpo-34 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: F29G6.3
      Molecular_name (18)
      Other_name: CELE_F29G6.3 Accession_evidence: NDB BX284606
      Public_name: hpo-34
    DB_info: Database: AceView gene XM130
        WormQTL gene WBGene00009259
        WormFlux gene WBGene00009259
        NDB locus_tag CELE_F29G6.3
        NCBI gene 181340
        RefSeq protein NM_077521.6
            NR_072137.1
            NM_001381107.1
            NM_001392846.1
            NM_077522.7
            NM_001029443.6
        TREEFAM TREEFAM_ID TF350348
        TrEMBL UniProtAcc Q6A2D2
            Q93637
            Q93636
            K8FDY0
            E3W743
        UniProt_GCRP UniProtAcc K8FDY0
        RNAcentral URSid URS000034D6FE
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-34
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele: WBVar01499887
      WBVar01499888
      WBVar01188446
      WBVar01188447
      WBVar01602200
      WBVar01188448
      WBVar01499710
      WBVar01188449
      WBVar01602201
      WBVar01188450
      WBVar01188451
      WBVar01188452
      WBVar01188453
      WBVar01188454
      WBVar01188455
      WBVar01188456
      WBVar01188457
      WBVar01188458
      WBVar01188459
      WBVar01188460
      WBVar01188461
      WBVar01188462
      WBVar01188463
      WBVar01188464
      WBVar01188465
      WBVar00244469
      WBVar01188466
      WBVar01188467
      WBVar01188468
      WBVar01188469
      WBVar01188470
      WBVar01188471
      WBVar01188472
      WBVar01188473
      WBVar01188474
      WBVar01188475
      WBVar01188476
      WBVar01188477
      WBVar01188478
      WBVar01188479
      WBVar01188480
      WBVar01188481
      WBVar01188482
      WBVar00517575
      WBVar01188483
      WBVar00517576
      WBVar01188484
      WBVar00517577
      WBVar01188485
      WBVar00517578
      WBVar00517579
      WBVar01188486
      WBVar00517580
      WBVar01188487
      WBVar01188488
      WBVar00517581
      WBVar01188489
      WBVar00517582
      WBVar00599178
      WBVar00517583
      WBVar01188490
      WBVar01188491
      WBVar00517584
      WBVar00517585
      WBVar01188492
      WBVar00301488
      WBVar01188493
      WBVar00517586
      WBVar01188494
      WBVar01711132
      WBVar00517587
      WBVar01188495
      WBVar00517588
      WBVar00517589
      WBVar01188496
      WBVar00278438
      WBVar01188497
      WBVar00517590
      WBVar01188498
      WBVar00517591
      WBVar01188499
      WBVar00517592
      WBVar01188500
      WBVar00517593
      WBVar01188501
      WBVar00517594
      WBVar00517595
      WBVar00603598
      WBVar01188502
      WBVar00603599
      WBVar00517596
      WBVar01188503
      WBVar01188504
      WBVar01188505
      WBVar00252164
      WBVar02009149
      WBVar02009150
      WBVar00261202
      WBVar00255689
      WBVar01816836
      WBVar01494275
      WBVar00083202
      WBVar00083203
      WBVar00083204
      WBVar00083205
      WBVar00083206
      WBVar02151537
      WBVar01690522
      WBVar01620597
      WBVar01690523
      WBVar01620598
      WBVar01690524
      WBVar01690525
      WBVar01620599
      WBVar01690526
      WBVar01620600
      WBVar01690527
      WBVar01620601
      WBVar00068465
      WBVar01787036
      WBVar02140127
      WBVar02039048
      WBVar02150094
      WBVar01471203
      WBVar01498960
      WBVar00094025
      WBVar01500067
    Strain: WBStrain00032851
    RNASeq_FPKM (74)
    GO_annotation: 00086315
      00086316
      00086317
    Ortholog (23)
    Structured_description: Automated_description: Predicted to enable kinase activity. Predicted to be involved in phosphorylation. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F29G6.3a
      F29G6.3b
      F29G6.3c
      F29G6.3d
      F29G6.3f
    Corresponding_CDS_history: F29G6.3a:wp121
    Corresponding_transcript: F29G6.3e
      F29G6.3a.1
      F29G6.3b.1
      F29G6.3c.1
      F29G6.3d.1
      F29G6.3f.1
      F29G6.3f.2
      F29G6.3f.3
    Other_sequence: CR04846
      CBC05176_1
      CRC08883_1
      HBC04486_1
      CJC08955_1
      ES414217.1
      ES740491.1
    Associated_feature (12)
  Experimental_info: RNAi_result (15)
    Expr_pattern: Expr1026055
      Expr1034038
      Expr1149838
      Expr2012574
      Expr2030810
    Drives_construct: WBCnstr00032335
    Construct_product: WBCnstr00032335
    Microarray_results (50)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00032031:DConiospora_downregulated_cDNA_24h
      WBPaper00032528:L3_enriched
      WBPaper00032976:dosage_compensated_genes
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00033070:Elbe_upregulated
      WBPaper00033070:Rhine_upregulated
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037047:aging_accelerated_insoluble_protein
      WBPaper00037047:insoluble_protein
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_embryo_enriched
      WBPaper00037950:intestine_embryo_SelectivelyEnriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_embryo_enriched
      WBPaper00037950:pharyngeal-muscle_embryo_SelectivelyEnriched
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038118:aak-2(gt33)_upregulated
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040990:PA14_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044557:DietaryRestriction_downregulated
      WBPaper00044656:tatn-1(qd182)_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045316:prg-1_upregulated_L1
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045417:128Q-huntingtin_downreglated
      WBPaper00045521:Gender_Neutral
      WBPaper00045934:wrn-1(gk99)_upregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
      WBPaper00048988:neuron_expressed
      WBPaper00049368:daf-2(e1370)_downregulated
      WBPaper00049498:npr-1(ur89)_regulated_3
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049732:blmp-1(tm548);daf-7(e1372ts)_vs_daf-7(e1372ts)_upregulated
      WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
      WBPaper00049905:Age_variant_expression
      WBPaper00049920:hyl-2(tm2031)_upregulated
      WBPaper00049942:hsf-1(RNAi)_downregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
      WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
      WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
      WBPaper00050332:skn-1(RNAi)_downregulated
      WBPaper00050412:cco-1(RNAi)_upregulated_N2
      WBPaper00050448:KGB-1-induced
      WBPaper00050468:hlh-30-dependent_Cry5B_regulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051039:intestine_enriched
      WBPaper00051245:cytoplasm_specific
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:intestine_specific
      WBPaper00051311:VGLN-1-interacting
      WBPaper00051352:Long-Term-Association-Memory_downregulated
      WBPaper00051461:pig-1(gm344)_downregulated
      WBPaper00051558:aging_regulated
      WBPaper00053094:adr-2(ok735)_neuron_downregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
      WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055060:flr-1(RNAi)_upregulated
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Metformin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rifampicin_downregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055827:daf-2(e1370)_downregulated
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056284:ints-2(RNAi)_downregulated
      WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056809:smn-1(ok355)_downregulated
      WBPaper00056826:hmc_biased
      WBPaper00056855:his-72(uge40)_downregulated
      WBPaper00056868:P.aeruginosa_upregulated_smallRNA
      WBPaper00056900:PID-3_interacting
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057140:pptr-1(tm3103)_upregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:set-2(bn129)_upregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059895:wounding_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060683:hlh-11(overexpression)_downregulated
      WBPaper00060871:M.humicola-infection_12h_regulated
      WBPaper00060908:TEBP-1_interacting
      WBPaper00060908:TEBP-2_interacting
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:I5
      WBPaper00061340:PVP
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061377:MYRF-2_interacting
      WBPaper00061377:PAN-1_interacting
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:C18B2.5-haf-4_181
      WBPaper00061527:hpo-6-C49C3.9
      WBPaper00061651:Intestine_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062590:Aging_upregulated_hypodermis
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064005:starvation_upregulated_N2_protein
      WBPaper00064055:trl-1(cas1077)_upregulated_starved
      WBPaper00064071:NHR-49_interacting
      WBPaper00064163:ZNFX-1_interacting_young-adult
      WBPaper00064716:paraquat_downregulated
      WBPaper00064871:hypoxia_upregulated_F1
      WBPaper00065086:JU1400_N.ausubeli_regulated
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065086:N2_N.ausubeli_regulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
      WBPaper00065373:sek-1(km4)_downregulated_cisplatin
      WBPaper00065373:sek-1(km4)_downregulated_Ref
      WBPaper00065835:Day11_vs_Day1_downregulated
      WBPaper00065841:3_1
      WBPaper00065841:3_2
      WBPaper00065841:3_4
      WBPaper00065841:3_5
      WBPaper00065841:21_1
      WBPaper00065841:30_3
      WBPaper00065841:61_0
      WBPaper00065841:94_0
      WBPaper00065975:P-body_vs_oocyte_depleted
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      cgc4386_cluster_1_2
      cgc4489_group_3
      WBPaper00005124:progesterone_10-7M_regulated
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00024671:AFD_AWB_vs_unsorted_downregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026980:intestine_enriched
      WBPaper00028474:dys-1_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00034661:AgNPs_downregulated
      WBPaper00035873:dpy-9_regulated
      WBPaper00035873:dpy-10_regulated
      WBPaper00037695:WC_5-day
      WBPaper00038231:Cry5B_1.5-fold_downregulated
      WBPaper00038427:lin-54_embryo_changed
      WBPaper00039851:Live_C_albicans_vs_HK_OP50
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040210:Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:TA200_up
      WBPaper00040963:TA300_up
      WBPaper00040985:AIN-2_asynchronous_intestine
      WBPaper00041002:HF_3d_0.2mM_Up
      WBPaper00041002:HF_3d_2.0mM_Up
      WBPaper00041002:HF_11d_0.2mM_Up
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:control_vs_EtBr-exposed_24h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_3h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
      WBPaper00042128:gei-8(ok1671)_downregulated
      WBPaper00042178:hlh-29(tm284)_upregulated
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00048624:hlh-25(ok1710)_upregulated
      WBPaper00048637:lin-35(n745)_starvation_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00057098:SiO2-nanoparticles_downregulated
      [cgc6390]:Cluster_C
    Interaction (193)
  Map_info: Map: X Position: 4.20843
    Positive: Positive_clone: F29G6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00061547
    WBPaper00064064
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene