WormBase Tree Display for Expression_cluster: WBPaper00045316:miRNA_prg-1_upregulated_L3
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| WBPaper00045316:miRNA_prg-1_upregulated_L3 | Description | miRNA with increased expression in prg-1(wm161) comparing to in N2. | |
|---|---|---|---|
| Species | Caenorhabditis elegans | ||
| Algorithm | DEGseq and GFOLD were used to analyze miRNAs expression. Authors chose miRNAs which had more than two-fold difference in expression (P < 0.001, q < 0.01 of Storey) from DEGseq, and miRNAs which had more than two-fold difference in expression (GFOLD score > 0 for up-regulation and GFOLD score < 0 for down-regulation) from GFOLD outcomes. Then authors obtained the intersection of up-regulated miRNAs and down-regulated miRNAs for each stage from the chosen miRNAs, respectively. | ||
| Reference | WBPaper00045316 | ||
| Based_on_WB_Release | |||
| Gene | WBGene00003039 | p-value: 1.77915654382651E-041 | |
| WBGene00003260 | p-value: 0 | ||
| WBGene00003272 | p-value: 0 | ||
| WBGene00003262 | p-value: 8.66669118936486E-088 | ||
| p-value: 0 | |||
| WBGene00003299 | p-value: 0 | ||
| WBGene00003347 | p-value: 7.18833866751198E-280 | ||
| WBGene00003328 | p-value: 0 | ||
| WBGene00003321 | p-value: 3.37367805041929E-014 | ||
| WBGene00003325 | p-value: 1.3214631052109E-062 | ||
| WBGene00003265 | p-value: 0 | ||
| WBGene00219221 | p-value: 2.74717101689038E-007 | ||
| WBGene00003282 | p-value: 3.37434896597058E-140 | ||
| WBGene00045354 | p-value: 3.31819237873592E-078 | ||
| WBGene00194824 | p-value: 4.53901136166217E-007 | ||
| WBGene00050924 | p-value: 2.08503596927065E-007 | ||
| WBGene00077721 | p-value: 0 | ||
| WBGene00003337 | p-value: 3.58763139329032E-135 | ||
| WBGene00045329 | p-value: 0 | ||
| WBGene00003300 | p-value: 0 | ||
| WBGene00003333 | p-value: 6.57697056863635E-141 | ||
| WBGene00003348 | p-value: 2.4995450618029E-037 | ||
| WBGene00003311 | p-value: 1.13901460383649E-009 | ||
| WBGene00003301 | p-value: 0.0008939015 | ||
| p-value: 0 | |||
| WBGene00003273 | p-value: 0 | ||
| WBGene00077725 | p-value: 1.33066169956793E-006 | ||
| WBGene00219223 | p-value: 3.75172406606725E-010 | ||
| WBGene00219265 | p-value: 4.85022439037207E-005 | ||
| Attribute_of | RNASeq | ||
| Regulation | Regulated_by_gene | WBGene00004178 | |
| Associated_with | Life_stage | WBls:0000035 |
