WormBase Tree Display for Gene: WBGene00113122
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WBGene00113122 | SMap | S_parent | Sequence | PPA_ChrX | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 11 | |||||||
Name | CGC_name | Ppa-unc-6 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA23568 | ||||||||
Molecular_name | PPA23568 | ||||||||
PPA23568.1 | |||||||||
PP57265 | |||||||||
Other_name | GENEPREDICTION_SNAP300000080463 | ||||||||
GENEPREDICTION_SNAP300000080464 | |||||||||
GENEPREDICTION_SNAP300000080465 | |||||||||
UMA-S344-3.38 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-unc-6 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:06 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-unc-6 | ||||
3 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00113123 | ||||
4 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00113124 | ||||
5 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00203257 | ||||
6 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
7 | 08 May 2019 10:09:25 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-6 | ||||
8 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
9 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-6 | ||||
10 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
11 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-6 | ||||
Acquires_merge | WBGene00113123 | ||||||||
WBGene00113124 | |||||||||
WBGene00203257 | |||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
RNASeq_FPKM | WBls:0000032 | 1.21582 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0.883883 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
1.21582 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
1.43583 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00095695 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00098403 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00099475 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00104946 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00109058 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00276112 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: WW domain; Laminin, N-terminal; UNC-6/NTR/C345C module; Laminin-type EGF domain; Tissue inhibitor of metalloproteinases-like, OB-fold; Netrin module, non-TIMP type; Laminin EGF domain; Laminin N-terminal (Domain VI); and WW domain superfamily. Is an ortholog of C. elegans unc-6. In C. elegans, unc-6 is involved in several processes, including axon guidance; regulation of locomotion; and sex differentiation. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA23568 | |||||||
Corresponding_transcript | PPA23568.1 | ||||||||
Other_sequence (18) | |||||||||
Experimental_info | Microarray_results (12) | ||||||||
Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
Remark | [190208 pad] The CGC name Ppa-unc-6 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
[200204 pad] The CGC name Ppa-unc-6 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
[210528 pad] The CGC name Ppa-unc-6 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
Method | Gene |