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WormBase Tree Display for Gene: WBGene00098403

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Name Class

WBGene00098403SMapS_parentSequencePPA_ChrIV
IdentityVersion4
NameCGC_namePpa-lam-1Inferred_automaticallyfrom gene merge
Sequence_namePPA08849
Molecular_namePPA08849
PPA08849.1
PP51543
Other_nameGENEPREDICTION_SNAP300000065391
GENEPREDICTION_SNAP300000065392
GENEPREDICTION_SNAP300000065393
UMA-S212-4.40Person_evidenceWBPerson606
Public_namePpa-lam-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
217 Nov 2017 15:19:42WBPerson4055Name_changeCGC_namePpa-lam-1
324 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00098404
424 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00098405
Acquires_mergeWBGene00098405
WBGene00098404
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classlam
RNASeq_FPKMWBls:00000322.16672From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010110.2347From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
2.16672From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.13381From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00177363
00177364
Ortholog (42)
ParalogWBGene00095695Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099475Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00104946Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109058Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00113122Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276112Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable translation release factor activity. Predicted to be involved in translational termination. Is an ortholog of C. elegans lam-1. In C. elegans, lam-1 is involved in pharynx development and positive regulation of locomotion.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA08849
Corresponding_transcriptPPA08849.1
Other_sequence (72)
Experimental_infoMicroarray_results (11)
MethodGene