WormBase Tree Display for Gene: WBGene00095695

WBGene00095695 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 9
    Name: CGC_name: Ppa-atrn-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA06141
      Molecular_name: PPA06141
        PPA06141.1
        PP69592
      Other_name: GENEPREDICTION_SNAP300000062505
        GENEPREDICTION_SNAP300000062507
        UMM-S2877-2.20 Person_evidence: WBPerson606
        Ppa-tag-53
      Public_name: Ppa-atrn-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:49 WBPerson4055 Event: Acquires_merge: WBGene00095697
        3 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00202573
        4 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00203732
        5 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-tag-53
        6 03 Jul 2018 11:45:27 WBPerson1983 Name_change: CGC_name: Retired non-elegans tag gene names
        7 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-atrn-1
        8 28 May 2021 19:05:20 WBPerson1983 Name_change: CGC_name: Removed
        9 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-atrn-1
      Acquires_merge: WBGene00095697
        WBGene00202573
        WBGene00203732
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atrn
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.252479 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0.757437 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
    Ortholog (31)
    Paralog: WBGene00098403 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099475 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00104946 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00109058 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113122 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276112 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: Kelch-type beta propeller; Spermadhesin, CUB domain superfamily; Kelch motif; Laminin-type EGF domain; Kelch repeat type 1; EGF-like domain; CUB domain; Laminin EGF domain; PSI domain; and Plexin repeat. Is an ortholog of C. elegans atrn-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA06141
    Corresponding_transcript: PPA06141.1
    Other_sequence (27)
  Experimental_info: Microarray_results (15)
    Expression_cluster: WBPaper00061743:ppa-eud-1(tu1069)_regulated
      WBPaper00041207:PP_dauer_down
  Remark: [210528 pad] The CGC name Ppa-atrn-1 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene