WormBase Tree Display for Gene: WBGene00044489
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WBGene00044489 | SMap | S_parent | Sequence | Y54G2A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pudl-1 | Person_evidence | WBPerson143 | |||
Sequence_name | Y54G2A.46 | ||||||
Molecular_name | Y54G2A.46 | ||||||
Y54G2A.46.1 | |||||||
CE38898 | |||||||
Other_name | CELE_Y54G2A.46 | Accession_evidence | NDB | BX284604 | |||
Public_name | pudl-1 | ||||||
DB_info | Database | AceView | gene | Y54G2A.46 | |||
WormFlux | gene | WBGene00044489 | |||||
NDB | locus_tag | CELE_Y54G2A.46 | |||||
Panther | gene | CAEEL|WormBase=WBGene00044489|UniProtKB=Q4R163 | |||||
family | PTHR31557 | ||||||
NCBI | gene | 3896803 | |||||
RefSeq | protein | NM_001038357.3 | |||||
TREEFAM | TREEFAM_ID | TF319694 | |||||
TrEMBL | UniProtAcc | Q4R163 | |||||
UniProt_GCRP | UniProtAcc | Q4R163 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pudl | ||||||
Allele (12) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00160152 | Caenorhabditis brenneri | From_analysis | OMA | |||
WBGene00142432 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
CSP31.g26801 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||
Cang_2012_03_13_00043.g2371 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||
Cang_2012_03_13_00999.g15302 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||
chrIV_pilon.g9871 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00017490 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WBGene00017498 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00017499 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WBGene00017500 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00017501 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00021236 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WBGene00044490 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Expressed in head neurons and hyp7 syncytium. Is predicted to encode a protein with the following domains: Up-Regulated in long-lived daf-2 and Up-regulated in Daf-2. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y54G2A.46 | |||||
Corresponding_transcript | Y54G2A.46.1 | ||||||
Associated_feature | WBsf995792 | ||||||
WBsf1016964 | |||||||
WBsf228060 | |||||||
Experimental_info | Expr_pattern | Expr11084 | |||||
Expr1023826 | |||||||
Expr1160909 | |||||||
Expr2015183 | |||||||
Drives_construct | WBCnstr00018116 | ||||||
WBCnstr00023522 | |||||||
Construct_product | WBCnstr00018116 | ||||||
WBCnstr00023522 | |||||||
Microarray_results (13) | |||||||
Expression_cluster (107) | |||||||
Map_info | Map | IV | Position | -6.73267 | |||
Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00042533 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |