WormBase Tree Display for Gene: WBGene00017501

WBGene00017501 SMap: S_parent: Sequence: F15E11
  Identity: Version: 2
    Name: CGC_name: pud-3 Person_evidence: WBPerson143
      Sequence_name: F15E11.15
      Molecular_name: F15E11.15
        F15E11.15.1
        CE33283
      Other_name: CELE_F15E11.15 Accession_evidence: NDB BX284605
      Public_name: pud-3
    DB_info: Database: AceView gene 5C802
        WormQTL gene WBGene00017501
        WormFlux gene WBGene00017501
        NDB locus_tag CELE_F15E11.15
        Panther gene CAEEL|WormBase=WBGene00017501|UniProtKB=G5EEV5
          family PTHR31557
        NCBI gene 178711
        RefSeq protein NM_001028634.4
        TrEMBL UniProtAcc G5EEV5
        UniProt_GCRP UniProtAcc G5EEV5
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:58 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Dec 2012 13:04:39 WBPerson2970 Name_change: CGC_name: pud-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pud
    Allele (27)
    RNASeq_FPKM (74)
    Ortholog (20)
    Paralog: WBGene00017490 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00017498 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00017499 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00017500 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00021236 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00044489 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00044490 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Expressed in head; hyp7 syncytium; pm3; and rectal gland cell. Is predicted to encode a protein with the following domains: Up-Regulated in long-lived daf-2 and Up-regulated in Daf-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F15E11.15
    Corresponding_CDS_history: F15E11.15:wp106
      F15E11.15:wp135
      F15E11.15a:wp250
    Corresponding_transcript: F15E11.15.1
    Other_sequence: FD514035.1
      FD517307.1
      CSC00243_1
      CBC04571_1
      FD514343.1
      FD516193.1
    Associated_feature: WBsf233410
  Experimental_info: RNAi_result: WBRNAi00031006 Inferred_automatically: RNAi_primary
      WBRNAi00097102 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11082
      Expr1016865
      Expr1148701
      Expr2015181
      Expr2033416
    Drives_construct: WBCnstr00018114
      WBCnstr00018115
      WBCnstr00027251
    Construct_product: WBCnstr00018114
      WBCnstr00027251
    Microarray_results (15)
    Expression_cluster (428)
    Interaction (16)
  Map_info: Map: V Position: -14.8742
    Positive: Positive_clone: F15E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00041549
    WBPaper00042533
    WBPaper00057516
    WBPaper00058665
    WBPaper00061938
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene