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WormBase Tree Display for Gene: WBGene00017498

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Name Class

WBGene00017498SMapS_parentSequenceF15E11
IdentityVersion2
NameCGC_namepud-4Person_evidenceWBPerson143
Sequence_nameF15E11.12
Molecular_nameF15E11.12a
F15E11.12a.1
CE25859
F15E11.12b
CE48210
F15E11.12b.1
Other_nameF15E11.gCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
F15E11.iCurator_confirmedWBPerson1983
RemarkOld cosmid naming mapped via unique overlapping PCR_product on CDSs
CELE_F15E11.12Accession_evidenceNDBBX284605
Public_namepud-4
DB_infoDatabaseAceViewgene5C805
WormQTLgeneWBGene00017498
WormFluxgeneWBGene00017498
NDBlocus_tagCELE_F15E11.12
PanthergeneCAEEL|WormBase=WBGene00017498|UniProtKB=M1ZJ62
familyPTHR31557
NCBIgene178712
RefSeqproteinNM_001307816.3
NM_001307817.4
TrEMBLUniProtAccM1ZMJ3
M1ZJ62
UniProt_GCRPUniProtAccM1ZJ62
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
220 Dec 2012 13:04:39WBPerson2970Name_changeCGC_namepud-4
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpud
Allele (23)
RNASeq_FPKM (74)
Ortholog (16)
ParalogWBGene00017490Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00017501Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017500Caenorhabditis elegansFrom_analysisTreeFam
WBGene00044489Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044490Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017499Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00021236Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionExpressed in hyp7 syncytium. Is predicted to encode a protein with the following domains: Up-regulated in Daf-2 and Up-Regulated in long-lived daf-2.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS290 version of WormBase
Date_last_updated11 Sep 2023 00:00:00
Molecular_infoCorresponding_CDSF15E11.12a
F15E11.12b
Corresponding_CDS_historyF15E11.12:wp112
F15E11.12:wp237
Corresponding_transcriptF15E11.12a.1
F15E11.12b.1
Other_sequenceCBC06473_1
Associated_featureWBsf999497
WBsf231503
Experimental_infoRNAi_resultWBRNAi00092883Inferred_automaticallyRNAi_primary
WBRNAi00031006Inferred_automaticallyRNAi_primary
WBRNAi00097112Inferred_automaticallyRNAi_primary
WBRNAi00013374Inferred_automaticallyRNAi_primary
WBRNAi00070124Inferred_automaticallyRNAi_primary
WBRNAi00097102Inferred_automaticallyRNAi_primary
WBRNAi00044729Inferred_automaticallyRNAi_primary
Expr_patternExpr11083
Expr1028595
Expr1148698
Expr2015182
Expr2033417
Drives_constructWBCnstr00018114
WBCnstr00018115
WBCnstr00027254
Construct_productWBCnstr00018115
WBCnstr00027254
Microarray_results (19)
Expression_cluster (396)
Interaction (47)
Map_infoMapVPosition-14.8734
PositivePositive_cloneF15E11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00029190
WBPaper00029226
WBPaper00042533
WBPaper00057516
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene