WormBase Tree Display for Gene: WBGene00022754
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| WBGene00022754 | SMap | S_parent | Sequence | ZK484 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | nspd | |||||
| Allele | WBVar01498782 | |||||
| WBVar00537250 | ||||||
| WBVar01499786 | ||||||
| WBVar01499054 | ||||||
| WBVar00641919 | ||||||
| WBVar00641920 | ||||||
| WBVar00641921 | ||||||
| WBVar01498959 | ||||||
| WBVar01500249 | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (87) | ||||||
| Paralog | WBGene00010633 | Caenorhabditis elegans | From_analysis | TreeFam | ||
| Inparanoid_8 | ||||||
| Panther | ||||||
| WormBase-Compara | ||||||
| WBGene00012781 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||
| Panther | ||||||
| WormBase-Compara | ||||||
| WBGene00016058 | Caenorhabditis elegans | From_analysis | Panther | |||
| WormBase-Compara | ||||||
| WBGene00017386 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Panther | ||||||
| WormBase-Compara | ||||||
| WBGene00017808 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Inparanoid_8 | ||||||
| Panther | ||||||
| WormBase-Compara | ||||||
| WBGene00020715 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Inparanoid_8 | ||||||
| WormBase-Compara | ||||||
| WBGene00020860 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Inparanoid_8 | ||||||
| Panther | ||||||
| WormBase-Compara | ||||||
| WBGene00021280 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Inparanoid_8 | ||||||
| Panther | ||||||
| WormBase-Compara | ||||||
| WBGene00043147 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Inparanoid_8 | ||||||
| WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including AVK; amphid sheath cell; coelomocyte; intestine; and sperm based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-two chemicals including Ethanol; methylmercury hydroxide; and nicotinic acid based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | ZK484.8 | ||||
| Corresponding_transcript | ZK484.8.1 | |||||
| Other_sequence | CBC01618_1 | |||||
| Associated_feature | WBsf219540 | |||||
| Experimental_info | RNAi_result | WBRNAi00059452 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00004941 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00022620 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00038310 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1162878 | |||||
| Expr2014478 | ||||||
| Expr2032717 | ||||||
| Drives_construct | WBCnstr00024001 | |||||
| Construct_product | WBCnstr00024001 | |||||
| Microarray_results (13) | ||||||
| Expression_cluster (241) | ||||||
| Interaction (195) | ||||||
| Map_info | Map | I | Position | 0.781024 | ||
| Positive | Positive_clone | ZK484 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
