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WormBase Tree Display for Gene: WBGene00022754

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Name Class

WBGene00022754SMapS_parentSequenceZK484
IdentityVersion2
NameCGC_namenspd-1Person_evidenceWBPerson1983
Sequence_nameZK484.8
Molecular_nameZK484.8
ZK484.8.1
CE15351
Other_nameCELE_ZK484.8Accession_evidenceNDBBX284601
Public_namenspd-1
DB_infoDatabaseAceViewgene1G674
WormQTLgeneWBGene00022754
WormFluxgeneWBGene00022754
NDBlocus_tagCELE_ZK484.8
PanthergeneCAEEL|WormBase=WBGene00022754|UniProtKB=O44902
familyPTHR35375
NCBIgene172292
RefSeqproteinNM_059358.6
TREEFAMTREEFAM_IDTF319437
TrEMBLUniProtAccO44902
UniProt_GCRPUniProtAccO44902
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:06WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
203 Oct 2006 09:54:23WBPerson2970Name_changeCGC_namenspd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnspd
AlleleWBVar01498782
WBVar00537250
WBVar01499786
WBVar01499054
WBVar00641919
WBVar00641920
WBVar00641921
WBVar01498959
WBVar01500249
RNASeq_FPKM (74)
Ortholog (87)
ParalogWBGene00010633Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00012781Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00016058Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017386Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017808Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00020715Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00020860Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00021280Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00043147Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including AVK; amphid sheath cell; coelomocyte; intestine; and sperm based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-two chemicals including Ethanol; methylmercury hydroxide; and nicotinic acid based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF780, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF780).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK484.8
Corresponding_transcriptZK484.8.1
Other_sequenceCBC01618_1
Associated_featureWBsf219540
Experimental_infoRNAi_resultWBRNAi00059452Inferred_automaticallyRNAi_primary
WBRNAi00004941Inferred_automaticallyRNAi_primary
WBRNAi00022620Inferred_automaticallyRNAi_primary
WBRNAi00038310Inferred_automaticallyRNAi_primary
Expr_patternExpr1162878
Expr2014478
Expr2032717
Drives_constructWBCnstr00024001
Construct_productWBCnstr00024001
Microarray_results (13)
Expression_cluster (241)
InteractionWBInteraction000100279
WBInteraction000100913
WBInteraction000101861
WBInteraction000102258
WBInteraction000102496
WBInteraction000103186
WBInteraction000103331
WBInteraction000103470
WBInteraction000103548
WBInteraction000104099
WBInteraction000104159
WBInteraction000104389
WBInteraction000104533
WBInteraction000104541
WBInteraction000104994
WBInteraction000105112
WBInteraction000105392
WBInteraction000105582
WBInteraction000105697
WBInteraction000105995
WBInteraction000106203
WBInteraction000106243
WBInteraction000106453
WBInteraction000107151
WBInteraction000107153
WBInteraction000108809
WBInteraction000108876
WBInteraction000109147
WBInteraction000109613
WBInteraction000109786
WBInteraction000110200
WBInteraction000111150
WBInteraction000112003
WBInteraction000112681
WBInteraction000115084
WBInteraction000116048
WBInteraction000116367
WBInteraction000117639
WBInteraction000118800
WBInteraction000118839
WBInteraction000118897
WBInteraction000119519
WBInteraction000122050
WBInteraction000124281
WBInteraction000126602
WBInteraction000133943
WBInteraction000134361
WBInteraction000136301
WBInteraction000136679
WBInteraction000137405
WBInteraction000138350
WBInteraction000138747
WBInteraction000142360
WBInteraction000142540
WBInteraction000143068
WBInteraction000143627
WBInteraction000144226
WBInteraction000144731
WBInteraction000144984
WBInteraction000145188
WBInteraction000146137
WBInteraction000148725
WBInteraction000149348
WBInteraction000149504
WBInteraction000151188
WBInteraction000151554
WBInteraction000152543
WBInteraction000159864
WBInteraction000160488
WBInteraction000161232
WBInteraction000163520
WBInteraction000170212
WBInteraction000170983
WBInteraction000171318
WBInteraction000171466
WBInteraction000172484
WBInteraction000177378
WBInteraction000178120
WBInteraction000180369
WBInteraction000183216
WBInteraction000184172
WBInteraction000184410
WBInteraction000185809
WBInteraction000186603
WBInteraction000190385
WBInteraction000191911
WBInteraction000191967
WBInteraction000192703
WBInteraction000194390
WBInteraction000197092
WBInteraction000199169
WBInteraction000199419
WBInteraction000203066
WBInteraction000203160
WBInteraction000203164
WBInteraction000205086
WBInteraction000205745
WBInteraction000208878
WBInteraction000210947
WBInteraction000213494
WBInteraction000215622
WBInteraction000217243
WBInteraction000218356
WBInteraction000220523
WBInteraction000223161
WBInteraction000223264
WBInteraction000223433
WBInteraction000224734
WBInteraction000225815
WBInteraction000227822
WBInteraction000236694
WBInteraction000241696
WBInteraction000243198
WBInteraction000253784
WBInteraction000254115
WBInteraction000258438
WBInteraction000259493
WBInteraction000265436
WBInteraction000267157
WBInteraction000267181
WBInteraction000269839
WBInteraction000270406
WBInteraction000272918
WBInteraction000273376
WBInteraction000276654
WBInteraction000276894
WBInteraction000276912
WBInteraction000278459
WBInteraction000278875
WBInteraction000288757
WBInteraction000289479
WBInteraction000290947
WBInteraction000291446
WBInteraction000296554
WBInteraction000296951
WBInteraction000298653
WBInteraction000301937
WBInteraction000302884
WBInteraction000303261
WBInteraction000303645
WBInteraction000304951
WBInteraction000307943
WBInteraction000308836
WBInteraction000308845
WBInteraction000311851
WBInteraction000313715
WBInteraction000318881
WBInteraction000321474
WBInteraction000322503
WBInteraction000322915
WBInteraction000324111
WBInteraction000337966
WBInteraction000339480
WBInteraction000350427
WBInteraction000352342
WBInteraction000353239
WBInteraction000360102
WBInteraction000360757
WBInteraction000360910
WBInteraction000361101
WBInteraction000361507
WBInteraction000365773
WBInteraction000371187
WBInteraction000371449
WBInteraction000373876
WBInteraction000373967
WBInteraction000377212
WBInteraction000377405
WBInteraction000378510
WBInteraction000383677
WBInteraction000387707
WBInteraction000392927
WBInteraction000395755
WBInteraction000395906
WBInteraction000402736
WBInteraction000406720
WBInteraction000412850
WBInteraction000423301
WBInteraction000427583
WBInteraction000430004
WBInteraction000431588
WBInteraction000433325
WBInteraction000435102
WBInteraction000442663
WBInteraction000442752
WBInteraction000444995
WBInteraction000447345
WBInteraction000448391
WBInteraction000451051
WBInteraction000452189
WBInteraction000456860
WBInteraction000460058
WBInteraction000460742
WBInteraction000576335
WBInteraction000581908
Map_infoMapIPosition0.781024
PositivePositive_cloneZK484Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene