WormBase Tree Display for Gene: WBGene00021408
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WBGene00021408 | SMap | S_parent | Sequence | Y38C1AB | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | trpl-4 | Person_evidence | WBPerson260 | |||
Sequence_name | Y38C1AB.6 | ||||||
Molecular_name | Y38C1AB.6 | ||||||
Y38C1AB.6.1 | |||||||
CE51291 | |||||||
Other_name | CELE_Y38C1AB.6 | Accession_evidence | NDB | BX284604 | |||
Public_name | trpl-4 | ||||||
DB_info | Database | AceView | gene | 4A768 | |||
WormFlux | gene | WBGene00021408 | |||||
NDB | locus_tag | CELE_Y38C1AB.6 | |||||
NCBI | gene | 189646 | |||||
RefSeq | protein | NM_001322762.1 | |||||
TREEFAM | TREEFAM_ID | TF315286 | |||||
TrEMBL | UniProtAcc | G5EE29 | |||||
UniProt_GCRP | UniProtAcc | G5EE29 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | trpl | ||||||
Allele (11) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00125771 | ||||||
00125772 | |||||||
00125773 | |||||||
00125774 | |||||||
Ortholog (15) | |||||||
Paralog | WBGene00004149 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00020972 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00021404 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00000425 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001651 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001795 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00001796 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008731 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y38C1AB.6 | |||||
Corresponding_CDS_history | Y38C1AB.6:wp252 | ||||||
Corresponding_transcript | Y38C1AB.6.1 | ||||||
Experimental_info | RNAi_result | WBRNAi00055994 | Inferred_automatically | RNAi_primary | |||
WBRNAi00055995 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018050 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020258 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00020253 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00018049 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1159515 | ||||||
Microarray_results (23) | |||||||
Expression_cluster (50) | |||||||
Interaction | WBInteraction000553648 | ||||||
Map_info | Map | IV | Position | -27.2457 | |||
Positive | Positive_clone | Y38C1AB | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |