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WormBase Tree Display for CDS: Y38C1AB.6

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Name Class

Y38C1AB.6EvidenceCurator_confirmedWBPerson4025
Inferred_automaticallymake_isoforms.pl
SMapS_parentSequenceY38C1AB
StructureSource_exons (12)
DB_infoDatabaseTrEMBLUniProtAccG5EE29
UniProtUniProtAccG5EE29
UniProt_GCRPUniProtAccG5EE29
AlphaFoldentryG5EE29
NCBI_proteinGI_numberGI:1003482383
TREEFAMTREEFAM_IDTF315286
Protein_idCHROMOSOME_IVCCD682582
DB_remarkTRPL-4 protein; contains similarity to Pfam domain PF00520 (Ion transport protein); contains similarity to Interpro domain IPR005821 (Ion transport domain)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusPredicted
VisibleGeneWBGene00021408
Corresponding_transcriptY38C1AB.6.1
Corresponding_proteinCE51291
Corresponding_PCR_product (13)
Corresponding_oligo_set (13)
RNAi_resultWBRNAi00055994
WBRNAi00055995
WBRNAi00018050
WBRNAi00020258
WBRNAi00020253
WBRNAi00018049
Microarray_results (23)
RNASeq_FPKM (74)
Last_reviewed11 Jan 2016 10:48:19WBPerson4025
Remark[160111 gw3] Changed exon seven based on the RNASeq splice data.Curator_confirmedWBPerson4025
From_analysisRNASeq
Methodcurated