WormBase Tree Display for Gene: WBGene00021236
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| WBGene00021236 | SMap | S_parent | Sequence | Y19D10B | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | pud | |||||
| Allele (20) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (14) | ||||||
| Paralog | WBGene00017490 | Caenorhabditis elegans | From_analysis | TreeFam | ||
| WBGene00017498 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00017499 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WormBase-Compara | ||||||
| WBGene00017500 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00017501 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00044489 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| WBGene00044490 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Structured_description | Concise_description | PUD-1.2, along with PUD-1.1, encodes a protein (CE25224) of unknown function; the PUD-1.2/PUD-1.1 proteins are present at significantly higher levels in daf-2 mutant vs. wild-type adults during a temperature shift from 15 to 25 degrees C; pud-1.2(RNAi) animals have no obvious mutant phenotype (i. e., they have no obvious defect in fertility or germline maintenance); the PUD-1.2/PUD-1.1 proteins belong to a nematode-specific family including the paralogs PUD-2.1, PUD-2.2, PUD-3, and PUD-4. | Paper_evidence | WBPaper00030894 | ||
| Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 12 Jun 2015 00:00:00 | |||||
| Automated_description | Expressed in hypodermis and intestine. Is predicted to encode a protein with the following domains: Up-Regulated in long-lived daf-2 and Up-regulated in Daf-2. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | Y19D10B.7 | ||||
| Corresponding_transcript | Y19D10B.7.1 | |||||
| Other_sequence | CBC06145_1 | |||||
| Associated_feature | WBsf233409 | |||||
| Experimental_info | RNAi_result | WBRNAi00044733 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00036705 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00044732 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr11080 | |||||
| Expr1159169 | ||||||
| Expr2015178 | ||||||
| Drives_construct | WBCnstr00017876 | |||||
| WBCnstr00017880 | ||||||
| WBCnstr00017882 | ||||||
| WBCnstr00018112 | ||||||
| WBCnstr00024611 | ||||||
| Construct_product | WBCnstr00017876 | |||||
| WBCnstr00017878 | ||||||
| WBCnstr00017880 | ||||||
| WBCnstr00017882 | ||||||
| WBCnstr00018112 | ||||||
| WBCnstr00024611 | ||||||
| Antibody | WBAntibody00001282 | |||||
| Microarray_results (18) | ||||||
| Expression_cluster (276) | ||||||
| Interaction (14) | ||||||
| Map_info | Map | V | Position | -14.8764 | ||
| Positive | Positive_clone | Y19D10B | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00024325 | |||||
| WBPaper00030894 | ||||||
| WBPaper00037428 | ||||||
| WBPaper00065331 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
