WormBase Tree Display for Gene: WBGene00020579

WBGene00020579 SMap: S_parent: Sequence: T19D12
  Identity: Version: 1
    Name: Sequence_name: T19D12.4
      Molecular_name: T19D12.4a
        T19D12.4a.1
        CE17238
        T19D12.4b
        CE39409
        T19D12.4b.1
      Other_name: CELE_T19D12.4 Accession_evidence: NDB BX284602
      Public_name: T19D12.4
    DB_info: Database: AceView gene 2G925
        WormQTL gene WBGene00020579
        WormFlux gene WBGene00020579
        NDB locus_tag CELE_T19D12.4
        NCBI gene 174096
        RefSeq protein NM_001381458.1
            NM_001373732.1
        TREEFAM TREEFAM_ID TF352517
        TrEMBL UniProtAcc O76836
            Q2V4T0
        UniProt_GCRP UniProtAcc O76836
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (96)
    RNASeq_FPKM (74)
    GO_annotation: 00038723
      00038724
      00038725
      00038726
      00038727
    Ortholog: WBGene00054129 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00027027 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00150745 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00127547 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00192392 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g7641 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g7616 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14304 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17488 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18196 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1548 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16176 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g7573 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8503 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00487.g11424 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T19D12.4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g12044 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00043.g2279 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13713 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006305 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20274810 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4817 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00000853 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003482 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003497 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00007800 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015865 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015993 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016048 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017965 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019570 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021343 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Involved in defense response to Gram-negative bacterium and innate immune response. Located in membrane raft. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T19D12.4a
      T19D12.4b
    Corresponding_CDS_history: T19D12.4:wp151
      T19D12.4a:wp145
      T19D12.4b:wp145
      T19D12.4c:wp145
    Corresponding_transcript: T19D12.4a.1
      T19D12.4b.1
    Other_sequence: CBC02494_1
      CJC01023_1
    Associated_feature: WBsf644311
      WBsf657702
      WBsf988214
      WBsf1012402
      WBsf221474
      WBsf221475
  Experimental_info: RNAi_result: WBRNAi00053532 Inferred_automatically: RNAi_primary
      WBRNAi00001873 Inferred_automatically: RNAi_primary
      WBRNAi00018844 Inferred_automatically: RNAi_primary
      WBRNAi00035666 Inferred_automatically: RNAi_primary
      WBRNAi00065107 Inferred_automatically: RNAi_primary
      WBRNAi00053533 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022248
      Expr1038968
      Expr1157100
      Expr2006260
      Expr2024478
    Drives_construct: WBCnstr00025035
    Construct_product: WBCnstr00025035
    Microarray_results (22)
    Expression_cluster (372)
    Interaction (24)
  Map_info: Positive: Positive_clone: T19D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II -0.0538868
  Reference: WBPaper00028482
    WBPaper00037777
  Method: Gene