WormBase Tree Display for Gene: WBGene00020128

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WBGene00020128	SMap	S_parent	Sequence	CHROMOSOME_X
	Identity	Version	2
		Name	Sequence_name	R193.2
			Molecular_name	R193.2
				R193.2.1
				CE48098
			Other_name	CELE_R193.2	Accession_evidence	NDB	BX284606
			Public_name	R193.2
		DB_info	Database	AceView	gene	XB752
				WormQTL	gene	WBGene00020128
				WormFlux	gene	WBGene00020128
				NDB	locus_tag	CELE_R193.2
				Panther	gene	CAEEL\|WormBase=WBGene00020128\|UniProtKB=Q9N5F6
					family	PTHR22588
				NCBI	gene	182256
				RefSeq	protein	NM_075817.5
				TrEMBL	UniProtAcc	Q9N5F6
				UniProt_GCRP	UniProtAcc	Q9N5F6
				OMIM	gene	120250
		Species	Caenorhabditis elegans
		History	Version_change	1	28 May 2004 13:31:02	WBPerson1971	Event	Imported	Initial conversion from CDS class of stlace from WS125
				2	23 Jul 2004 11:11:23	WBPerson1849	Event	Acquires_merge	WBGene00015475
			Acquires_merge	WBGene00015475
		Status	Live
	Gene_info	Biotype	SO:0001217
		Allele (147)
		RNASeq_FPKM (74)
		GO_annotation	00095396
		Ortholog (26)
		Structured_description	Automated_description	Predicted to be located in membrane. Human ortholog(s) of this gene implicated in Bethlem myopathy; Ullrich congenital muscular dystrophy; and dystonia 27. Is an ortholog of human COL6A3 (collagen type VI alpha 3 chain).	Paper_evidence	WBPaper00065943
					Curator_confirmed	WBPerson324
						WBPerson37462
					Inferred_automatically	This description was generated automatically by a script based on data from the WS291 version of WormBase
					Date_last_updated	29 Nov 2023 00:00:00
	Disease_info	Potential_model (17)
	Molecular_info	Corresponding_CDS	R193.2
		Corresponding_CDS_history	R193.2:wp128
			R193.2:wp171
			R193.2:wp236
		Corresponding_transcript	R193.2.1
		Other_sequence	CBC03966_1
		Associated_feature	WBsf653687
			WBsf1003955
			WBsf1003956
			WBsf1003957
			WBsf1003958
			WBsf1022221
			WBsf237006
	Experimental_info	RNAi_result	WBRNAi00017897	Inferred_automatically	RNAi_primary
			WBRNAi00052019	Inferred_automatically	RNAi_primary
			WBRNAi00009082	Inferred_automatically	RNAi_primary
			WBRNAi00039766	Inferred_automatically	RNAi_primary
			WBRNAi00010218	Inferred_automatically	RNAi_primary
			WBRNAi00028507	Inferred_automatically	RNAi_primary
		Expr_pattern	Expr1023854
			Expr1038754
			Expr1155659
			Expr2005674
			Expr2023890
		Drives_construct	WBCnstr00025356
		Construct_product	WBCnstr00025356
		Microarray_results (27)
		Expression_cluster	WBPaper00030922:glycosylated_protein
			WBPaper00031040:Cluster_1
			WBPaper00031040:TGF-beta_adult_upregulated
			WBPaper00031486:daf-16_upregulated
			WBPaper00033065:clk-1(qm30)_upregulated
			WBPaper00033065:isp-1-1(qm150)_upregulated
			WBPaper00036738:4uM_Heme_upregulated
			WBPaper00037950:intestine_embryo_enriched
			WBPaper00037950:intestine_embryo_SelectivelyEnriched
			WBPaper00038061:aldicarb_upregulated
			WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
			WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
			WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
			WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
			WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
			WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
			WBPaper00040560:hpl-2_L3_upregulated
			WBPaper00041071:spe-44_upregulated
			WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
			WBPaper00042215:wdr-23(tm1817)_downregulated
			WBPaper00042561:smg-2(RNAi)_downregulated
			WBPaper00044260:1-methylnicotinamide_upregulated
			WBPaper00044426:rotenone_24h_downregulated
			WBPaper00044501:gld-1_let-7_regulated
			WBPaper00044578:reduced-humidity_downregulated_microarray
			WBPaper00044656:tatn-1(qd182)_upregulated
			WBPaper00044736:oscillating_dev_expression
			WBPaper00045316:prg-1_upregulated_L1
			WBPaper00045316:prg-1_upregulated_L2
			WBPaper00045316:prg-1_upregulated_L3
			WBPaper00045316:prg-1_upregulated_L4
			WBPaper00045390:ubc-9(RNAi)_upregulated
			WBPaper00045420:fertilization_downregulated_transcript
			WBPaper00045521:Gender_Neutral
			WBPaper00045774:clk-1_upregulated
			WBPaper00045934:wrn-1(gk99)_upregulated
			WBPaper00046012:tdp-1(ok803)_downregulated
			WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_upregulated
			WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
			WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
			WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
			WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
			WBPaper00046805:csr-1(RNAi)_downregulated_Set1
			WBPaper00046805:csr-1(RNAi)_downregulated_Set2
			WBPaper00048971:daf-16(mgDf50)_upregulated_L1
			WBPaper00048988:neuron_expressed
			WBPaper00049018:ham-3(RNAi)_upregulated
			WBPaper00049217:TCER-1_upregulated
			WBPaper00049266:NaAsO2-Stress_regulated_N2
			WBPaper00049368:daf-2(e1370)_downregulated
			WBPaper00049377:MWCNT_upregulated
			WBPaper00049498:npr-1(ur89)_regulated_3
			WBPaper00049545:jmjd-3.1(+)_upregulated
			WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
			WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
			WBPaper00049905:Age_variant_expression
			WBPaper00049920:hyl-2(tm2031)_upregulated
			WBPaper00049942:HeatShock_downregulated_hsf-1(+)
			WBPaper00049942:hsf-1(RNAi)_downregulated
			WBPaper00049954:BPA_upregulated
			WBPaper00049954:BPS_downregulated
			WBPaper00050096:P.aeruginosa_downregulated
			WBPaper00050121:mir-60(n4947)_upregulated
			WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
			WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
			WBPaper00050225:flp-6(RNAi)_upregulated
			WBPaper00050332:daf-16(RNAi)_downregulated
			WBPaper00050332:skn-1(RNAi)_downregulated
			WBPaper00050370:dpy-21(e428)_L3_downregulated
			WBPaper00050488:adult_vs_dauer_regulated_N2_20C
			WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
			WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
			WBPaper00050522:mafr-1(tm6082)_downregulated
			WBPaper00050726:OsmoticStress_regulated_Food
			WBPaper00050726:OsmoticStress_regulated_NoFood
			WBPaper00050859:upregulated_glh-1(gk100)_vs_control_day1-adult
			WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
			WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
			WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
			WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
			WBPaper00051021:4-bromodiphenyl-ether_upregulated
			WBPaper00051039:intestine_enriched
			WBPaper00051257:Levamisole_downregulated
			WBPaper00051388:Glucose-diet_upregulated
			WBPaper00051558:aging_regulated
			WBPaper00053023:nrx-1(tm1961)_upregulated
			WBPaper00053184:sma-2(rax5)_upregulated
			WBPaper00053184:sma-4(rax3)_upregulated
			WBPaper00053302:zidovudine_72h_regulated
			WBPaper00053321:PGCs_depleted_NuGen
			WBPaper00053388:dauer_regulated_Cluster1
			WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
			WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
			WBPaper00053615:SMO-1_target
			WBPaper00053771:up_at_24h-NaCl
			WBPaper00053771:up_at_dpy-7(e88)
			WBPaper00053810:daf-2(e1370)_downregulated
			WBPaper00053814:15C_upregulated_OP50
			WBPaper00054191:H3.3(null)_L1_upregulated
			WBPaper00054796:cav-1(RNAi)_upregulated
			WBPaper00055060:flr-1(RNAi)_upregulated
			WBPaper00055334:DLC-1_interacting
			WBPaper00055354:Rapamycin-Psora_upregulated
			WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
			WBPaper00055354:Rifampicin-Allantoin_downregulated
			WBPaper00055626:pry-1(mu38)_downregulated
			WBPaper00055862:antimycin_damt-1(gk961032)_regulated
			WBPaper00055897:heat-shock_downregulated
			WBPaper00055944:C.butyricum_vs_OP50_upregulated
			WBPaper00055971:nhl-2(ok818)_20C_downregulated
			WBPaper00055971:nhl-2(ok818)_25C_downregulated
			WBPaper00055981:fog-2(q71)_downregulated
			WBPaper00056073:R24_upregulated_nhr-86_dependent
			WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
			WBPaper00056090:E.faecalis_upregulated_N2
			WBPaper00056161:hermaphrodite_enriched_siRNA
			WBPaper00056167:Cry5B_downregulated
			WBPaper00056167:ifo-1(kc2)_downregulated
			WBPaper00056218:daf-16(mu86)_downregulated_Day5
			WBPaper00056218:daf-16(mu86)_downregulated_Day7
			WBPaper00056443:sek-1(km4)_upregulated
			WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
			WBPaper00056471:S.aureus-4h_upregulated_N2
			WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay4
			WBPaper00056586:kri-1(ok1251);mpk-2(ok219)_downregulated
			WBPaper00056809:smn-1(ok355)_downregulated
			WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
			WBPaper00057136:yap-1(ys38)_downregulated
			WBPaper00057154:HeatShock_downregulated_mRNA
			WBPaper00057196:raga-1(ok386)_downregulated)
			WBPaper00057288:Cold_upregulated_transcript
			WBPaper00058598:mex-1(or286)_upregulated
			WBPaper00058598:mex-3(eu149)_upregulated
			WBPaper00058598:sin-3(tm1276)_downregulated
			WBPaper00058598:spn-4(tm291)_upregulated
			WBPaper00058948:npr-8(ok1439)_upregulated_PA14
			WBPaper00058969:RIS_depleted
			WBPaper00059117:B.subtilis_downregulated
			WBPaper00059253:sucrose_stearic-acid_upregulated
			WBPaper00059253:sucrose_upregulated
			WBPaper00059566:P.aeruginosa_downregulated
			WBPaper00059566:P.luminescens_downregulated
			WBPaper00059566:wdr-23(mac32)_upregulated
			WBPaper00059604:fluvastatin_downregulated_dlk-1(km12)
			WBPaper00059604:fluvastatin_downregulated_N2
			WBPaper00059605:mut-16(pk710)_upregulated
			WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
			WBPaper00059839:S.maltophilia_regulated
			WBPaper00059895:wounding_downregulated
			WBPaper00059987:Wounding_downregulated
			WBPaper00060014:set-2(tm1630)_downregulated
			WBPaper00060084:cco-1(RNAi)_upregulated_lin-40(yth27)
			WBPaper00060278:atp-2(RNAi)_upregulated
			WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
			WBPaper00060358:B.thuringiensis_non-pathogen_regulated_N2
			WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
			WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
			WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
			WBPaper00060445:ikb-1(nr2027)_upregulated_L4
			WBPaper00060683:hlh-11(ko1)_downregulated
			WBPaper00060683:hlh-11(overexpression)_downregulated
			WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
			WBPaper00061007:HB101_upregulated
			WBPaper00061007:HB115_upregulated
			WBPaper00061081:E.faecalis_upregulated_N2
			WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
			WBPaper00061203:sin-3(tm1276)_upregulated
			WBPaper00061340:g2
			WBPaper00061340:M4_parent
			WBPaper00061341:28C_24h_downregulated
			WBPaper00061341:28C_48h_downregulated
			WBPaper00061390:daf-22(ok693)_ascarosides_upregulated
			WBPaper00061424:Diet_MYb120_downregulated
			WBPaper00061478:pie-1(ne4433)_upregulated
			WBPaper00061479:hda-1(ne4752)_upregulated
			WBPaper00061479:mep-1(ne4629)_upregulated
			WBPaper00061479:ubc-9(ne4833)_upregulated
			WBPaper00061527:sre-33-ZK1025.1_8337
			WBPaper00061527:W07B8.1-C15C8.3
			WBPaper00061590:CGP37157_upregulated
			WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_downregulated
			WBPaper00061818:AFD_enriched_protein
			WBPaper00062159:hda-2(ok1479)_upregulated
			WBPaper00062193:hsf-1(RNAi)_downregulated
			WBPaper00062325:muscle_depleted_coding-RNA
			WBPaper00062345:bortezomib_4h_downregulated_N2
			WBPaper00062354:H.zoospora_6h_regulated
			WBPaper00062354:H.zoospora_12h_regulated
			WBPaper00062440:crh-1(n3315)_upregulated
			WBPaper00062440:crh-1(syb385)_upregulated
			WBPaper00062446:nhr-8(hd117)_upregulated
			WBPaper00062669:extracellular-vesicle_protein
			WBPaper00062672:let-418(n3536)dcp-66(RNAi)_downregulated
			WBPaper00062684:pathogen_upregulated_CB4856
			WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
			WBPaper00064005:starvation_downregulated_N2_mRNA
			WBPaper00064005:starvation_upregulated_N2_protein
			WBPaper00064071:NHR-49_interacting
			WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
			WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
			WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
			WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
			WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
			WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
			WBPaper00064130:Beta-Amyloid_downregulated_protein
			WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
			WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
			WBPaper00064532:pals-25(icb98)_downregulated
			WBPaper00064632:daf-2(e1370)_upregulated_intestine
			WBPaper00064637:cox-5B(RNAi)_upregulated
			WBPaper00064716:paraquat_downregulated
			WBPaper00064871:hypoxia_upregulated_F1
			WBPaper00064871:PA14_downregulated_AWA
			WBPaper00064952:Day10_vs_L4_downregulated_20C
			WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
			WBPaper00065158:AFD_depleted
			WBPaper00065225:nhr-42(tm1375)_downregulated_S.aureus-infected
			WBPaper00065258:anchor-cell_depleted
			WBPaper00065373:Cisplatin_downregulated_WT
			WBPaper00065392:Lb.delbrueckii_upregulated
			WBPaper00065392:Lb.gasseri_upregulated
			WBPaper00065392:Lb.plantarum_upregulated
			WBPaper00065392:Lb.reuteri_upregulated
			WBPaper00065392:Lb.rhamnosus_upregulated
			WBPaper00065392:P.pentosaceus_upregulated
			WBPaper00065578:gcn-1(nc40)_downregulated
			WBPaper00065734:unc-25(e156)_upregulated
			WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
			WBPaper00065835:Day5_vs_Day1_downregulated
			WBPaper00065835:Day11_vs_Day1_downregulated
			WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
			WBPaper00065975:P-body_vs_WholeAnimal_depleted
			WBPaper00065993:glp-1(e2141)_upregulated
			WBPaper00066085:sin-3(tm1276)_upregulated
			WBPaper00066110:Doxorubicin_downregulated_diploid
			WBPaper00066204:CdCl2_upregulated_mRNA
			cgc4386_cluster_1_3
			cgc4489_group_3
			WBPaper00025141:N2_Expressed_Genes
			WBPaper00026929:Resveratrol_regulated_daf-16
			WBPaper00026929:sir-2.1_overexpression_regulated
			WBPaper00026952:class_G
			WBPaper00026980:intestine_enriched
			WBPaper00028789:PA14_vs_gacA_downregulated_4hr
			WBPaper00028789:PA14_vs_gacA_downregulated_8hr
			WBPaper00028789:PA14_vs_OP50_downregulated_8hr
			WBPaper00031252:AIN-1_IP_enriched
			WBPaper00031252:AIN-2_IP_enriched
			WBPaper00031532:Larva_Pan_Neuronal_Depleted
			WBPaper00031703:heme_responsive_2
			WBPaper00032062:age_regulated_genes
			WBPaper00032948:FedUp
			WBPaper00034661:AgNPs_downregulated
			WBPaper00034757:down_by_oxidative_stress
			WBPaper00035479:daf-16(RNAi)_upregulated
			WBPaper00035873:osmotically_regulated
			WBPaper00036286:Pattern_G
			WBPaper00037113:DZN_16C_up-regulated
			WBPaper00037695:LD_DD_6-day
			WBPaper00037695:WC_5-day
			WBPaper00038231:Cry5B_1.5-fold_downregulated
			WBPaper00038231:Cry5B_2-fold_downregulated
			WBPaper00039866:ClassComp_daf-19_downregulated
			WBPaper00040116:pRJ-FR.5_down_regulated
			WBPaper00040184:hcf-1down_sir-2.1down_daf-2down
			WBPaper00040858:eQTL_age_regulated_developing
			WBPaper00040858:eQTL_regulated_developing
			WBPaper00040858:eQTL_regulated_juvenile
			WBPaper00041002:HQ_3d_2.0mM_Down
			WBPaper00041207:CE_dauer_down
			WBPaper00041211:RPW-24_Up
			WBPaper00041370:spg-7(RNAi)_upregulated
			WBPaper00041606:CE_S.marcescens_regulated
			WBPaper00041606:CE_X.nematophila_regulated
			WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
			WBPaper00044091:Bpseudomallei_repressed_2h
			WBPaper00045673:colistin_upregulated
			WBPaper00047070:N2_starvation_downregulated
			WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
			WBPaper00048989:N2_allantoin_upregulated
			WBPaper00053236:Starvation_regulated_GR1307
			WBPaper00053236:Starvation_regulated_N2
			WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
			WBPaper00053550:daf-19(m86)_downregulated_L1
			WBPaper00053688:E.faecalis_upregulated
			WBPaper00053688:E.faecium_upregulated
			WBPaper00055899:2,4-Dinitroanisole_regulated
			WBPaper00057098:SiO2-nanoparticles_downregulated
			[cgc6390]:intrinsic
			[cgc6390]:male_soma-enriched
		Interaction	WBInteraction000551540
	Map_info	Positive	Positive_clone	R193	Inferred_automatically	From sequence, transcript, pseudogene data
		Interpolated_map_position	X	-18.485
	Reference	WBPaper00026952
		WBPaper00061938
	Method	Gene