WormBase Tree Display for Gene: WBGene00020052
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| WBGene00020052 | SMap | S_parent | Sequence | R13A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R13A5.10 | |||||||
| Molecular_name | R13A5.10 | ||||||||
| R13A5.10.1 | |||||||||
| CE01371 | |||||||||
| Other_name | CELE_R13A5.10 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R13A5.10 | ||||||||
| DB_info | Database | AceView | gene | 3I668 | |||||
| WormQTL | gene | WBGene00020052 | |||||||
| WormFlux | gene | WBGene00020052 | |||||||
| NDB | locus_tag | CELE_R13A5.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020052|UniProtKB=Q95Y87 | |||||||
| family | PTHR11079 | ||||||||
| NCBI | gene | 260136 | |||||||
| RefSeq | protein | NM_066262.3 | |||||||
| TREEFAM | TREEFAM_ID | TF313782 | |||||||
| TrEMBL | UniProtAcc | Q95Y87 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y87 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01500260 | ||||||||
| WBVar01499774 | |||||||||
| WBVar02151345 | |||||||||
| WBVar00060810 | |||||||||
| WBVar00401789 | |||||||||
| WBVar00401790 | |||||||||
| WBVar00401791 | |||||||||
| WBVar00401792 | |||||||||
| Strain | WBStrain00002209 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089767 | ||||||||
| 00089768 | |||||||||
| 00124775 | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00010436 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00012968 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00007440 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012927 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015574 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016495 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020747 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | R13A5.10 encodes a cytidine deaminase; by homology the product of R13A5.10 is predicted to function in deamination of cytidine to uracil; large-scale expression studies indicate that R13A5.10 is expressed in larvae and adults and seen in the excretory cell and the nervous system. | Paper_evidence | WBPaper00024352 | |||||
| WBPaper00031006 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 25 Feb 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable guanosine deaminase activity. Predicted to be involved in purine nucleoside catabolic process. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R13A5.10 | |||||||
| Corresponding_transcript | R13A5.10.1 | ||||||||
| Other_sequence (42) | |||||||||
| Associated_feature | WBsf227006 | ||||||||
| WBsf227007 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017816 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005679 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034913 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram528 | ||||||||
| Expr6519 | |||||||||
| Expr1015591 | |||||||||
| Expr1155542 | |||||||||
| Expr2005628 | |||||||||
| Expr2023844 | |||||||||
| Drives_construct | WBCnstr00002951 | ||||||||
| WBCnstr00025399 | |||||||||
| Construct_product | WBCnstr00025399 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (170) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | R13A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.663837 | |||||||
| Reference | WBPaper00024352 | ||||||||
| Method | Gene |
