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WormBase Tree Display for Sequence: R13A5

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Name Class

R13A5DNAR13A556444
SMapS_child (12)
StructureFromSourceCHROMOSOME_III
Overlap_rightY80D4G53762
Overlap_leftC07H6
Clone_right_endC07H6201
Y69F1239198
Y69F12A39198
DB_infoDatabaseEMBLNDB_ACFO080424
NDB_ID_AC006679
NDB_SVFO080424.2
Secondary_accessionAC006679
DB_remarkThe 5' clone is C07H6, 200 bp overlap; the 3' clone is Y80D4G, 2683 bp overlap.
[121025] Sequence correction: SNP 0 bases @ 49681
[121025] Sequence correction WBsf268191 : Insertion T1 bases from @ 1302
[121025] Sequence correction WBsf268560 : Insertion G1 bases from @ 20186
[121025] Sequence correction WBsf268326 : Deletion G-1 bases @ 48639
[121025] Sequence correction WBsf268148 : Deletion C-1 bases @ 49902
[121025] Sequence correction WBsf267860 : Deletion A-1 bases @ 50026
KeywordHTG
EMBL_dump_infoEMBL_dump_methodworm_EMBL-dump
OriginFrom_authorMacri C
Vaudin M
From_laboratoryRW
Date28 Oct 1999 00:00:00
02 Jun 1994 00:00:00
Date_directory
SpeciesCaenorhabditis elegans
VisibleCloneR13A5
ReferenceWBPaper00015050
RemarkR13A5.12 and .13 were fused based on EST data - 990202 -js
[20100427 wnash] deleted -1 bp at position 48923 (between ATATTAATGG and GTTATTGAAT)
[20100428 wnash] deleted -1 bp at position 49207 (between TATGATATGC and CCTATAAATG)
[20100428 wnash] deleted -1 bp at position 48761 (between TGCCATGTAG and GGTAATTAAT)
PropertiesGenomic_canonical
ChecksumMD5e0a59cce35e94e266d64ea0deaa23fbd
StatusFinished
Submitted28 Oct 1999 00:00:00
MapSequence-III
Interpolated_map_positionIII-0.666629
MethodGenomic_canonical