Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00018971

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00018971SMapS_parentSequenceF56D6
IdentityVersion2
NameCGC_nameclec-67Person_evidenceWBPerson261
WBPerson655
Sequence_nameF56D6.2
Molecular_nameF56D6.2
F56D6.2.1
CE31546
F56D6.2.2
Other_nameCELE_F56D6.2Accession_evidenceNDBBX284604
Public_nameclec-67
DB_infoDatabaseAceViewgene4E687
WormQTLgeneWBGene00018971
WormFluxgeneWBGene00018971
NDBlocus_tagCELE_F56D6.2
PanthergeneCAEEL|WormBase=WBGene00018971|UniProtKB=Q8ITX4
familyPTHR23062
NCBIgene177151
RefSeqproteinNM_068036.7
TREEFAMTREEFAM_IDTF317818
TrEMBLUniProtAccQ8ITX4
UniProt_GCRPUniProtAccQ8ITX4
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-67
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (51)
StrainWBStrain00032778
RNASeq_FPKM (74)
GO_annotation00105832
Ortholog (22)
Paralog (45)
Structured_descriptionConcise_descriptionclec-67 encodes a C-type lectin; clec-67 expression is upregulated in response to bacterial infection; clec-67 is expressed in the intestine and its expression is regulated by the ELT-2 GATA transcription factor.Paper_evidenceWBPaper00028945
WBPaper00041211
Curator_confirmedWBPerson1843
Date_last_updated19 Feb 2014 00:00:00
Automated_descriptionInvolved in PERK-mediated unfolded protein response. Expressed in intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF56D6.2
Corresponding_CDS_historyF56D6.2:wp82
Corresponding_transcriptF56D6.2.1
F56D6.2.2
Other_sequenceJI459262.1
Associated_featureWBsf645894
WBsf228136
WBsf228137
WBsf228138
WBsf228139
Experimental_infoRNAi_resultWBRNAi00020639Inferred_automaticallyRNAi_primary
WBRNAi00032963Inferred_automaticallyRNAi_primary
WBRNAi00048721Inferred_automaticallyRNAi_primary
Expr_patternExpr1000
Expr4512
Expr1038189
Expr1152473
Expr2010200
Expr2028441
Drives_constructWBCnstr00012070
WBCnstr00026155
Construct_productWBCnstr00026155
Microarray_results (17)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00032022:X-Ray_upregulated
WBPaper00032425:up_in_lin-35
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:intestine_larva_SelectivelyEnriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038237:age-1_upregulated_intestine_rescue
WBPaper00038237:age-1_upregulated_neuron_rescue
WBPaper00038237:age-1_upregulated_nontransgenic
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045316:prg-1_upregulated_L1
WBPaper00045316:prg-1_upregulated_L3
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045521:Gender_Neutral
WBPaper00046496:Rifampicin_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00046497:B.thuringiensis_upregulated_protein
WBPaper00046509:htz-1(ok3099)_upregulated
WBPaper00046509:lin-35(n745)_upregulated
WBPaper00046805:csr-1(RNAi)_downregulated_Set1
WBPaper00046805:P-granule-RNAi_downregulated_Set1
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00047132:glp-1(ts)-25C_upregulated
WBPaper00048952:glucose_repressed
WBPaper00049098:hrde-1(tm1200)-induced_23C
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049484:elt-2(RNAi)_downregulated_L4
WBPaper00049498:npr-1(ur89)_regulated_5
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049920:hyl-2(tm2031)_upregulated
WBPaper00050096:P.aeruginosa_upregulated
WBPaper00050182:lmn-1(L535P)_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:ash-2(RNAi)_regulated_intestine
WBPaper00051039:intestine_enriched
WBPaper00051265:F4_hrde-1(tm1200)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053020:sid-3(ok973)_upregulated
WBPaper00053020:sta-1(ok587)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053402:his-3(RNAi)_upregulated
WBPaper00053606:elt-2(ca15)_vs_elt-2(ca15);elt-7(tm840)_doenregulated
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053713:Starvation-induced_postdauer_vs_control_upregulated
WBPaper00053810:clk-1(qm30)_downregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:OP50_vs_PY79_downregulated_PY79
WBPaper00054410:set-26(tm2467)_upregulated
WBPaper00054810:deoxynivalenol_upregulated
WBPaper00054872:egl-9(sa307)_upregulated
WBPaper00055049:S.gordonii_upregulated
WBPaper00055137:S.maltophilia_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055827:pfd-6(gk493446)_downregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00055941:hif-1(ia4)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056073:R24_upregulated_nhr-86_dependent
WBPaper00056167:Cry5B_downregulated
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L2
WBPaper00056218:daf-16(mu86)_downregulated_Day7
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_atf-7(qd22qd130)_dependent
WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay1
WBPaper00056550:ceh-60(ok1485)_upregulated_AdultDay4
WBPaper00056586:kri-1(ok1251);mpk-2(ok219)_downregulated
WBPaper00056826:hmc_biased
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_downregulated
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057068:Cadmium_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00057143:ztf-11(RNAi)_upregulated
WBPaper00057265:metaformin_downregulated_OP50
WBPaper00057265:metaformin_downregulated_OP50-MR
WBPaper00057347:nhr-14(tm1473)_upreglated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058665:graphene-oxide_upregulated_mRNA
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058948:npr-8(ok1439)_downregulated_OP50
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059253:sucrose_downregulated
WBPaper00059253:sucrose_stearic-acid_downregulated
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059567:olrn-1(ums9)_regulated
WBPaper00059604:fluvastatin_downregulated_dlk-1(km12)
WBPaper00059604:fluvastatin_downregulated_N2
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059735:glucose_downregulated_N2
WBPaper00059739:hira-1(gk835598)_upregulated_adult
WBPaper00059754:P.aeruginosa_PA14_upregulated
WBPaper00059824:rnp-6(dh1127)_regulated_OP50
WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060084:cco-1(RNAi)_upregulated_N2
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060399:CoCl2_6hr_upregulated_N2
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060683:hlh-11(overexpression)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060886:spr-5(by101);met-2(n4256)_downregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00060909:atfs-1(et18)_upregulated
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061007:HB101_upregulated
WBPaper00061007:M.braciatum_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
WBPaper00061106:endu-2(tm4977)_upregulated
WBPaper00061319:pnp-1(jy90)_upregulated
WBPaper00061319:pnp-1(jy121)_upregulated
WBPaper00061340:ADL
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061340:DVA
WBPaper00061340:SIA
WBPaper00061341:28C_24h_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:F55G11.8-dod-17
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_20C
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00061800:miR-85(n4117)_downregulated_20C
WBPaper00062118:neural-HSF-1_upregulated
WBPaper00062156:jmjd-1.2(zr1010)_downregulated
WBPaper00062156:jmjd-5(zr1234)_updownregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062446:nhr-8(ok186)_upregulated
WBPaper00062456:doxycycline_upregulated_CB4856_protein
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062520:qui-1(db104)_upregulated
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062672:dcp-66(RNAi)_downregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_downregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064505:tamoxifen_upregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00064762:freezing-thaw_regulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00064788:ketamine_upregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065029:cadmium_upregulated
WBPaper00065149:lin-52(n771)_downregulated
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065158:AFD_depleted
WBPaper00065272:dhgd-1(tm6671)_upregulated
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065581:hpk-1(pk1393)_downregulated
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065749:endu-2(tm4977)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065759:dot-1.1(knu339)_upregulated
WBPaper00065823:pmk-1(km25)_downregulated
WBPaper00065835:Day5_vs_Day1_upregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:81_0
WBPaper00065877:rege-1(imm070)_upregulated_OP50
WBPaper00065926:pgph-2(overepxreesion)_upregulated_glucose
WBPaper00065945:epidermis-rpoa-2(-)_downregulated_transcript
WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066004:ceh-14(ch3)_downregulated
WBPaper00066005:RAGA-1_degradation_somatic_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066118:cyclobutrifluram_upregulated
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4386_cluster_1_3
cgc4489_group_25
WBPaper00025099:MA_specific
WBPaper00027722:Microbacterium_nematophilum_upregulated
WBPaper00028474:dys-1_upregulated
WBPaper00028482:PA14_upregulated
WBPaper00028789:PA14_vs_gacA_upregulated_4hr
WBPaper00028789:PA14_vs_gacA_upregulated_8hr
WBPaper00028789:PA14_vs_OP50_upregulated_4hr
WBPaper00028789:PA14_vs_OP50_upregulated_8hr
WBPaper00028789:pmk-1_upregulated
WBPaper00029437:dcr-1_upregulated
WBPaper00029437:rde-4_upregulated
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00032948:StarveUp1
WBPaper00034661:AgNPs_downregulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osmotically_regulated
WBPaper00035891:zip-2(RNAi)_downregulated
WBPaper00035892:KIM5_vs_OP50_Up
WBPaper00035892:Y.pestis_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036383:ash-2_L3_regulated
WBPaper00038060:SUMO-1_downregulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038304:octr-1_regulated
WBPaper00038462:aging_downregulated
WBPaper00039792:TempShiftIncrease
WBPaper00039851:Live_C_albicans_vs_HK_C_albicans
WBPaper00039851:Live_C_albicans_vs_HK_OP50
WBPaper00040184:hcf-1up_sir-2.1down_daf-2nc
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040876:mir-35_downregulated
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040963:TA100_up
WBPaper00040963:TA200_up
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041211:RPW-24_Up
WBPaper00041267:SpaceFlight_Downregulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_EtBr-exposed_24h
WBPaper00041939:control_vs_EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-EtBr-exposed_24h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_24h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00042067:Cu2+_upregulated_WT
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00042258:HT115_upregulated_YoungAdult
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00042574:JU1580_OrsayVirus_upregulated
WBPaper00044091:Bpseudomallei_induced_4h
WBPaper00044091:Bpseudomallei_induced_8h
WBPaper00044091:Bpseudomallei_induced_12h
WBPaper00044091:Bpseudomallei_regulated_qPCR-confirmed
WBPaper00045673:colistin_upregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00046548:dafachronic-acid_downregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00049311:AgNO3_regulated
WBPaper00050520:lagr-1(gk327);hyl-1(ok976)_upregulated
WBPaper00050650:mBmkTX_upregulated
WBPaper00050767:Octopamine_induced
WBPaper00053688:E.faecalis_downregulated
WBPaper00053688:E.faecium_downregulated
WBPaper00055435:MUA-AuNP-0.5_upregulated
WBPaper00055435:MUA-AuNP-3_upregulated
WBPaper00055899:nitroguanidine_regulated
[cgc5976]:class_2
[cgc6390]:Cluster_B
Interaction (19)
WBProcessWBbiopr:00000039
WBbiopr:00000092
Map_infoMapIVPosition-1.69011Error0.017302
PositivePositive_cloneF56D6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (12)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene