WormBase Tree Display for Gene: WBGene00015467
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| WBGene00015467 | SMap | S_parent | Sequence | C05D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | basl-1 | Paper_evidence | WBPaper00024422 | |||||
| Person_evidence | WBPerson384 | ||||||||
| WBPerson260 | |||||||||
| Sequence_name | C05D2.3 | ||||||||
| Molecular_name | C05D2.3 | ||||||||
| C05D2.3.1 | |||||||||
| CE29022 | |||||||||
| Other_name | CELE_C05D2.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | basl-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2012 16:42:47 | WBPerson2970 | Name_change | CGC_name | basl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | basl | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00031578 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00000239 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001839 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006409 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006562 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017392 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00004981 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006418 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006762 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007593 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022427 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | C05D2.3 generally resembles aromatic-L-amino-acid/L-histidine decarboxylases; however, its predicted protein sequence lacks six residues critical for AADC function. | Paper_evidence | WBPaper00004403 | |||||
| WBPaper00004651 | |||||||||
| WBPaper00006395 | |||||||||
| Person_evidence | WBPerson384 | ||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 05 Aug 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable aromatic-L-amino-acid decarboxylase activity. Predicted to be involved in catecholamine metabolic process and serotonin biosynthetic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including aromatic L-amino acid decarboxylase deficiency; bipolar disorder; and hyperinsulinism. Is an ortholog of human DDC (dopa decarboxylase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:3312 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||
| DOID:0090123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| DOID:14330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| DOID:655 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| DOID:2018 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| Molecular_info | Corresponding_CDS | C05D2.3 | |||||||
| Corresponding_transcript | C05D2.3.1 | ||||||||
| Associated_feature | WBsf992455 | ||||||||
| WBsf992456 | |||||||||
| WBsf992457 | |||||||||
| WBsf992458 | |||||||||
| WBsf992459 | |||||||||
| WBsf1014917 | |||||||||
| WBsf1014918 | |||||||||
| WBsf1014919 | |||||||||
| WBsf1014920 | |||||||||
| WBsf224970 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005120 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000720 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022274 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039750 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020655 | ||||||||
| Expr1143842 | |||||||||
| Expr2009532 | |||||||||
| Expr2027769 | |||||||||
| Drives_construct | WBCnstr00028824 | ||||||||
| Construct_product | WBCnstr00028824 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (162) | |||||||||
| Interaction | WBInteraction000342557 | ||||||||
| WBInteraction000500584 | |||||||||
| Map_info | Map | III | Position | -1.46902 | |||||
| Positive | Positive_clone | C05D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00016920 | ||||||||
| WBPaper00017338 | |||||||||
| WBPaper00023952 | |||||||||
| WBPaper00024422 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
