WormBase Tree Display for Gene: WBGene00015467
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| WBGene00015467 | SMap | S_parent | Sequence | C05D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | basl-1 | Paper_evidence | WBPaper00024422 | |||||
| Person_evidence | WBPerson384 | ||||||||
| WBPerson260 | |||||||||
| Sequence_name | C05D2.3 | ||||||||
| Molecular_name | C05D2.3 | ||||||||
| C05D2.3.1 | |||||||||
| CE29022 | |||||||||
| Other_name | CELE_C05D2.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | basl-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2012 16:42:47 | WBPerson2970 | Name_change | CGC_name | basl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | basl | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00031578 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00000239 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00001839 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006409 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00006562 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017392 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00004981 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006418 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00006762 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00007593 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00022427 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:3312 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||
| DOID:0090123 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| DOID:14330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| DOID:655 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| DOID:2018 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2719) | ||||||
| Molecular_info | Corresponding_CDS | C05D2.3 | |||||||
| Corresponding_transcript | C05D2.3.1 | ||||||||
| Associated_feature | WBsf992455 | ||||||||
| WBsf992456 | |||||||||
| WBsf992457 | |||||||||
| WBsf992458 | |||||||||
| WBsf992459 | |||||||||
| WBsf1014917 | |||||||||
| WBsf1014918 | |||||||||
| WBsf1014919 | |||||||||
| WBsf1014920 | |||||||||
| WBsf224970 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005120 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00000720 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022274 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039750 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020655 | ||||||||
| Expr1143842 | |||||||||
| Expr2009532 | |||||||||
| Expr2027769 | |||||||||
| Drives_construct | WBCnstr00028824 | ||||||||
| Construct_product | WBCnstr00028824 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (162) | |||||||||
| Interaction | WBInteraction000342557 | ||||||||
| WBInteraction000500584 | |||||||||
| Map_info | Map | III | Position | -1.46902 | |||||
| Positive | Positive_clone | C05D2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00016920 | ||||||||
| WBPaper00017338 | |||||||||
| WBPaper00023952 | |||||||||
| WBPaper00024422 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
