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WormBase Tree Display for Gene: WBGene00006926

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Name Class

WBGene00006926SMapS_parentSequenceC42D8
IdentityVersion1
NameCGC_namevit-2Person_evidenceWBPerson71
Sequence_nameC42D8.2
Molecular_nameC42D8.2
C42D8.2.1
CE06950
Other_nameCELE_C42D8.2Accession_evidenceNDBBX284606
Public_namevit-2
DB_infoDatabaseWormQTLgeneWBGene00006926
WormFluxgeneWBGene00006926
NDBlocus_tagCELE_C42D8.2
PanthergeneCAEEL|WormBase=WBGene00006926|UniProtKB=P05690
familyPTHR23345
NCBIgene180781
RefSeqproteinNM_076467.7
SwissProtUniProtAccP05690
UniProt_GCRPUniProtAccP05690
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvit
Allele (95)
Legacy_informationStructural gene for vitellogenin yp170B.
[C.elegansII] NMK. 4.9 kb transcript, specific to adult hermaphrodite intestine, encodes vitellogenin yp170B (67% identity to VIT-5). Extensive promoter analysis. [Speith et al. 1985b; MacMorris et al. 1994; BL]
Strain (11)
RNASeq_FPKM (74)
GO_annotation00038891
00038892
00038893
00038894
00038895
00038896
00038897
00038898
00115036
00115037
Ortholog (64)
ParalogWBGene00006925Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00006927Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006928Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006929Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00006930Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionvit-2 encodes the vitellogenin homolog YP170; vit-2 is expressed in the adult hermaphrodite intestine and VIT-2 is secreted into the pseudocoelomic space before being taken up by developing oocytes; vit-2 expression is regulated in a sex-, stage-, and tissue-specific manner by the ELT-2/GATA and MAB-3 transcription factors.Paper_evidenceWBPaper00003831
WBPaper00004538
WBPaper00032471
WBPaper00001864
WBPaper00003452
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated24 Mar 2014 00:00:00
Automated_descriptionPredicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Located in cytoplasmic vesicle; vesicle lumen; and yolk granule. Expressed in embryonic cell; gonad; intestine; oocyte; and pseudocoelom.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC42D8.2
Corresponding_CDS_historyC42D8.2:wp176
C42D8.2b:wp271
Corresponding_transcriptC42D8.2.1
Other_sequence (264)
Associated_feature (19)
Experimental_infoRNAi_resultWBRNAi00095269Inferred_automaticallyRNAi_primary
WBRNAi00042364Inferred_automaticallyRNAi_primary
WBRNAi00095273Inferred_automaticallyRNAi_primary
WBRNAi00063230Inferred_automaticallyRNAi_primary
WBRNAi00001993Inferred_automaticallyRNAi_primary
WBRNAi00063231Inferred_automaticallyRNAi_primary
Expr_patternExpr520
Expr11396
Expr12138
Expr12674
Expr16161
Expr1015447
Expr1032943
Expr1146349
Expr2018001
Expr2036137
Drives_construct (19)
Construct_productWBCnstr00000145
WBCnstr00012417
WBCnstr00018820
WBCnstr00021273
WBCnstr00022596
WBCnstr00034094
WBCnstr00041719
Regulate_expr_clusterWBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051305:vit-2(ac3)_upregulated
AntibodyWBAntibody00000018
Microarray_results (21)
Expression_clusterWBPaper00005700:transmembrane_protein
WBPaper00006195:azacoprostane_downregulated
WBPaper00024276:N-glycosylated_protein
WBPaper00030894:daf-2(e1370ts)_downregulated
WBPaper00030922:glycosylated_protein
WBPaper00032528:L3_depleted
WBPaper00033065:isp-1-1(qm150)_upregulated
WBPaper00036738:4uM_Heme_upregulated
WBPaper00037047:aging_accelerated_insoluble_protein
WBPaper00037047:insoluble_protein
WBPaper00037109:cyclophilin-inhibitor_regulated
WBPaper00037624:ets-4(ok165)_downregulated
WBPaper00037682:sma-2_sma-4_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_embryo_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038289:oocyte_protein
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00039838:LEC-6_binding_protein
WBPaper00040134:nhr-49(RNAi)_regulated_protein
WBPaper00040209:B.thuringiensis_downregulated_MY18
WBPaper00040446:insoluble_protein
WBPaper00040965:lipid-droplet_associated_protein
WBPaper00040965:top50_lipid-droplet_associated_protein
WBPaper00041072:UTX-1_interacting_protein
WBPaper00041097:pgl-1_upregulated
WBPaper00041954:ethanol_upregulated
WBPaper00042165:let-7_downregulated
WBPaper00042215:wdr-23(tm1817)_downregulated
WBPaper00043951:insoluble_protein_day16_N2
WBPaper00044027:tyrosol_regulated
WBPaper00044030:nhr-8(hd117)_downregulated
WBPaper00044037:eat-2_downregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044426:rotenone_24h_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044736:rising_dev_expression
WBPaper00044746:aging_upregulated_Day5
WBPaper00044760:germline_specific
WBPaper00045017:blmp-1(tm548)_downregulated
WBPaper00045316:prg-1_downregulated_L4
WBPaper00045316:prg-1_upregulated_L1
WBPaper00045401:N.parisii_64h_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00046012:tdp-1(ok803)_downregulated
WBPaper00046217:gas-1(fc21)_downregulated
WBPaper00046217:mev-1(kn1)_downregulated
WBPaper00046337:monosomal_N2_vs_daf-2_upregulated
WBPaper00046337:polysomal_daf-2_vs_daf-2;daf-16_upregulated
WBPaper00046421:cdc-48.2(tm659)_upregulated
WBPaper00046446:rapid-synthesized_YoungAdult
WBPaper00046741:Garlic-Extract_downregulated_protein
WBPaper00046795:starvation_downregulated
WBPaper00048611:MnCl2_downregulated
WBPaper00048910:mRNA-interacting_protein
WBPaper00048988:neuron_expressed
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00049266:NaAsO2-Stress_regulated_N2
WBPaper00049266:trx-1(ok1449)_regulated_unstressed
WBPaper00049489:AMsh-glia_enriched
WBPaper00049498:npr-1(ur89)_regulated_8
WBPaper00049626:UNC-75_target
WBPaper00049905:Age_variant_expression
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050080:rbr-2(tm3141)_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_24-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050182:lmn-1(L535P)_downregulated
WBPaper00050231:hermaphrodite_enriched
WBPaper00050412:cco-1(RNAi)_downregulated_lin-65(n3441)
WBPaper00050412:cco-1(RNAi)_downregulated_met-2(ok2307)
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050522:mafr-1(tm6082)_downregulated
WBPaper00050636:aging_regulated_insoluble_protein
WBPaper00050698:DEP-1_interacting
WBPaper00050717:let-7(n2853)_lin-41(xe11)_downregulated
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050928:male-mating_upregulated
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:intestine_enriched
WBPaper00051164:Nel-protein-infection_regulated
WBPaper00051305:vit-2(ac3)_downregulated
WBPaper00051404:alg-1(gk214)_upregulated
WBPaper00051404:alg-2(ok304)_upregulated
WBPaper00051461:pig-1(gm344)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053154:human-amyloid-beta_tau_regulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053318:Aging_upregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00053402:his-3(RNAi)_downregulated
WBPaper00053599:female_vs_male_downregulated
WBPaper00053713:Pheromone-induced_postdauer_vs_control_upregulated
WBPaper00053782:daf-2(RNAi)_oocyte_downregulated
WBPaper00054192:cold-shock_downregulated
WBPaper00054410:set-26(tm2467)_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00054810:deoxynivalenol_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055049:S.gordonii_downregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055941:atfs-1(et15)_downregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00056139:soil-microbiota_upregulated
WBPaper00056167:Cry5B_upregulated
WBPaper00056218:daf-16(mu86)_downregulated_Day7
WBPaper00056284:ints-1(RNAi)_upregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056290:mdt-15(mg584)_downregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056550:ceh-60(ok1485)_downregulated_AdultDay1
WBPaper00056550:ceh-60(ok1485)_downregulated_AdultDay4
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00056900:PID-3_interacting
WBPaper00056900:TOFU-6_interacting
WBPaper00056900:TOST-1_interacting
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057140:pptr-1(tm3103)_upregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058691:CFP-1_interacting_protein
WBPaper00058801:ceh-60(lst466)_downregulated_protein
WBPaper00058886:anp-1(ok608)_downregulated
WBPaper00058945:mir-1(gk276)_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059253:stearic-acid_upregulated
WBPaper00059253:sucrose_upregulated
WBPaper00059254:CSR-1_interacting
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059605:MUT-16_interacting
WBPaper00059609:malt-1_ilc-17.1_nfki-1_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_downregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00060084:cco-1(RNAi)_downregulated_lin-40(yth27)
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060399:pqm-1(ok485)_downregulated_CoCl2_6hr
WBPaper00060445:ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L4
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-infection_12h_regulated
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00060908:TEBP-1_interacting
WBPaper00060908:TEBP-2_interacting
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_downregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061341:28C_48h_downregulated
WBPaper00061377:MYRF-1_interacting
WBPaper00061393:C.albicans_regulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061479:ubc-9(ne4833)_upregulated
WBPaper00061527:vit-2-vit-4_22519
WBPaper00061653:alh-4(hj221)_downregulated
WBPaper00061740:mir-1(gk276)_downregulated_protein
WBPaper00062002:Day4-adult_secretome
WBPaper00062143:PQN-59_interacting
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:hsf-1(RNAi)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00062446:nhr-8(hd117)_downregulated
WBPaper00062456:doxycycline_downregulated_N2_protein
WBPaper00062498:PPM-1.D_interacting
WBPaper00062520:qui-1(db104)_upregulated
WBPaper00062554:MAGU-2_interacting
WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
WBPaper00062590:Aging_upregulated_hypodermis
WBPaper00062590:Aging_upregulated_neuron
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_downregulated_aptf-1(gk794)_protein
WBPaper00064055:trl-1(cas1077)_upregulated_non-starved
WBPaper00064055:trl-1(cas10778)_upregulated_non-starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064122:vulva_transcriptome
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064201:SNA-1_interacting
WBPaper00064201:SNA-3_interacting
WBPaper00064257:UNG-1_interacting
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064565:dyf-1(mn335)_regulated_protein
WBPaper00064716:paraquat_downregulated
WBPaper00064789:Day3_vs_Day1_upregulated_neuron
WBPaper00064789:Day6_vs_Day1_upregulated_neuron
WBPaper00064789:Day9_vs_Day1_upregulated_neuron
WBPaper00064789:Day12_vs_Day1_upregulated_neuron
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00064933:E.coli-binding_secret_protein
WBPaper00064952:Day5_vs_L4_upregulated_25C
WBPaper00064952:Day10_vs_Day1_upregulated_25C
WBPaper00064952:Day10_vs_L4_upregulated_20C
WBPaper00064952:Day10_vs_L4_upregulated_25C
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:AFD_depleted
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065623:28
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:3_0
WBPaper00065841:3_1
WBPaper00065841:3_2
WBPaper00065841:3_4
WBPaper00065841:3_5
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:Doxorubicin_downregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066204:CdCl2_downregulated_mRNA
WBPaper00066232:hsf-1(RNAi)_downregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_downregulated_WT
cgc4386_cluster_2_1
cgc4489_group_9
WBPaper00005124:estrogen_10-5M_regulated
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026980:intestine_enriched
WBPaper00027342:alpha-Synuclein(A53T)_upregulated
WBPaper00027342:alpha-Synuclein(WT)_upregulated
WBPaper00028948:cep-1(gk138)+UV_upregulated
WBPaper00031252:AIN-2_IP_enriched
WBPaper00031703:heme_responsive_2
WBPaper00032062:age_regulated_genes
WBPaper00032165:differentially_expressed_with_age_medoid_4
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_D
WBPaper00036383:ash-2_L3_regulated
WBPaper00037113:CPF_16C_down-regulated
WBPaper00037113:CPF_DZN_16C_down-regulated
WBPaper00037113:DZN_16C_down-regulated
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:tax-6null_up_regulated
WBPaper00038231:Cry5B_1.5-fold_downregulated
WBPaper00038231:Cry5B_2-fold_downregulated
WBPaper00039835:ifg-1_upregulated
WBPaper00040963:TA300_down
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00042128:gei-8(ok1671)_upregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00044091:Bpseudomallei_repressed_8h
WBPaper00044091:Bpseudomallei_repressed_12h
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00056330:mrps-5(RNAi)_downregulated
[cgc5976]:class_2
Interaction (317)
Map_infoMapXPosition-6.18804Error0.002606
PositivePositive_cloneC42D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
U32
Pseudo_map_position
Reference (114)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene