WormBase Tree Display for Gene: WBGene00006928

WBGene00006928 SMap: S_parent: Sequence: CHROMOSOME_X
  Identity: Version: 1
    Name: CGC_name: vit-4 Person_evidence: WBPerson71
      Sequence_name: F59D8.2
      Molecular_name: F59D8.2
        F59D8.2.1
        CE26817
      Other_name: F59D8.a Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        F59D8.b Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_F59D8.2 Accession_evidence: NDB BX284606
      Public_name: vit-4
    DB_info: Database: AceView gene XE176
        WormQTL gene WBGene00006928
        WormFlux gene WBGene00006928
        NDB locus_tag CELE_F59D8.2
        Panther gene CAEEL|WormBase=WBGene00006928|UniProtKB=P18947
          family PTHR23345
        NCBI gene 180646
        RefSeq protein NM_076211.8
        SwissProt UniProtAcc P18947
        TREEFAM TREEFAM_ID TF332911
        UniProt_GCRP UniProtAcc P18947
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vit
    Allele (36)
    Legacy_information: Structural gene for vitellogenin yp170A; adjacent to vit-3.
      [C.elegansII] NMK. Encodes vitellogenin yp170A (95% identical to VIT-5). Gene adjacent and nearly identical to vit-3. [Speith et al. 1985b; BL]
    Strain: WBStrain00032883
      WBStrain00047209
    RNASeq_FPKM (74)
    GO_annotation: 00039636
      00039637
      00039638
      00039639
      00115040
      00115041
    Ortholog (92)
    Paralog: WBGene00006925 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00006926 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00006927 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00006930 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00006929 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Predicted to be located in extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F59D8.2
    Corresponding_transcript: F59D8.2.1
    Other_sequence (125)
    Associated_feature: WBsf1004666
      WBsf237187
  Experimental_info: RNAi_result (42)
    Expr_pattern: Expr16163
      Expr1152928
      Expr2036139
    Drives_construct: WBCnstr00034092
    Construct_product: WBCnstr00034092
    Microarray_results (17)
    Expression_cluster (389)
    Interaction (61)
  Map_info: Map: X Position: -10.0749 Error: 0.015222
    Positive: Positive_clone: F59D8 Inferred_automatically: From sequence, transcript, pseudogene data
        YOLK3-8
    Pseudo_map_position
  Reference (26)
  Remark: F56B6.a changed to overlapping F59D8.2 by J.Spieth [sdm 0103]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene