WormBase Tree Display for CDS: F59D8.2
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F59D8.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F59D8 | |||
Structure | Source_exons | 1 | 864 | |||
929 | 1213 | |||||
1261 | 4298 | |||||
4348 | 4576 | |||||
4626 | 4761 | |||||
4814 | 5073 | |||||
DB_info | Database | SwissProt | UniProtAcc | P18947 | ||
UniProt | UniProtAcc | P18947 | ||||
UniProt_GCRP | UniProtAcc | P18947 | ||||
AlphaFold | entry | P18947 | ||||
NCBI_protein | GI_number | GI:351063736 | ||||
TREEFAM | TREEFAM_ID | TF332911 | ||||
Protein_id | CHROMOSOME_X | CCD71958 | 1 | |||
DB_remark | VIT-4 protein; contains similarity to Pfam domains PF00094 (von Willebrand factor type D domain), PF01347 (Lipoprotein amino terminal region), PF09172 (Vitellinogen, open beta-sheet); contains similarity to Interpro domains IPR001747 (Vitellogenin, N-terminal), IPR001846 (von Willebrand factor, type D domain), IPR015255 (Vitellinogen, open beta-sheet), IPR015819 (Lipid transport protein, beta-sheet shell), IPR011030 (Lipovitellin-phosvitin complex, superhelical domain), IPR015816 (Vitellinogen, beta-sheet N-terminal) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006928 | ||||
Corresponding_transcript | F59D8.2.1 | |||||
Corresponding_protein | CE26817 | |||||
Corresponding_PCR_product (12) | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (462) | ||||||
RNAi_result (42) | ||||||
Microarray_results (17) | ||||||
Brief_identification | Vitellogenin-4 | Accession_evidence | UniProt | SP:P18947 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |