WormBase Tree Display for CDS: C42D8.2
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C42D8.2 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | C42D8 | |||
Structure | Source_exons | 1 | 873 | |||
926 | 1210 | |||||
1257 | 4436 | |||||
4485 | 4731 | |||||
4780 | 5036 | |||||
DB_info | Database | SwissProt | UniProtAcc | P05690 | ||
UniProt | UniProtAcc | P05690 | ||||
UniProt_GCRP | UniProtAcc | P05690 | ||||
AlphaFold | entry | P05690 | ||||
NCBI_protein | GI_number | GI:351058187 | ||||
Protein_id | CHROMOSOME_X | CCD65563 | 1 | |||
DB_remark | VIT-2 protein; contains similarity to Pfam domains PF00094 (von Willebrand factor type D domain), PF01347 (Lipoprotein amino terminal region), PF09172 (Vitellinogen, open beta-sheet); contains similarity to Interpro domains IPR015819 (Lipid transport protein, beta-sheet shell), IPR011030 (Lipovitellin-phosvitin complex, superhelical domain), IPR001747 (Vitellogenin, N-terminal), IPR015816 (Vitellinogen, beta-sheet N-terminal), IPR001846 (von Willebrand factor, type D domain), IPR015255 (Vitellinogen, open beta-sheet) | |||||
Origin | From_laboratory | RW | ||||
Species | Caenorhabditis elegans | |||||
Properties | Coding | CDS | ||||
Prediction_status | Confirmed | |||||
Visible | Gene | WBGene00006926 | ||||
Corresponding_transcript | C42D8.2.1 | |||||
Corresponding_protein | CE06950 | |||||
Corresponding_PCR_product | cenix:182-h5 | |||||
mv_CAA39669 | ||||||
sjj_C42D8.2 | ||||||
Corresponding_oligo_set (16) | ||||||
Matching_cDNA (229) | ||||||
RNAi_result | WBRNAi00095269 | |||||
WBRNAi00042364 | ||||||
WBRNAi00095273 | ||||||
WBRNAi00063230 | ||||||
WBRNAi00001993 | ||||||
WBRNAi00063231 | ||||||
Microarray_results (17) | ||||||
Brief_identification | Vitellogenin-2 | Accession_evidence | UniProt | SP:P05690 | ||
RNASeq_FPKM (74) | ||||||
Method | curated |