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WormBase Tree Display for CDS: C42D8.2

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Name Class

C42D8.2EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC42D8
StructureSource_exons1873
9261210
12574436
44854731
47805036
DB_infoDatabaseSwissProtUniProtAccP05690
UniProtUniProtAccP05690
UniProt_GCRPUniProtAccP05690
AlphaFoldentryP05690
NCBI_proteinGI_numberGI:351058187
Protein_idCHROMOSOME_XCCD655631
DB_remarkVIT-2 protein; contains similarity to Pfam domains PF00094 (von Willebrand factor type D domain), PF01347 (Lipoprotein amino terminal region), PF09172 (Vitellinogen, open beta-sheet); contains similarity to Interpro domains IPR015819 (Lipid transport protein, beta-sheet shell), IPR011030 (Lipovitellin-phosvitin complex, superhelical domain), IPR001747 (Vitellogenin, N-terminal), IPR015816 (Vitellinogen, beta-sheet N-terminal), IPR001846 (von Willebrand factor, type D domain), IPR015255 (Vitellinogen, open beta-sheet)
OriginFrom_laboratoryRW
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00006926
Corresponding_transcriptC42D8.2.1
Corresponding_proteinCE06950
Corresponding_PCR_productcenix:182-h5
mv_CAA39669
sjj_C42D8.2
Corresponding_oligo_set (16)
Matching_cDNA (229)
RNAi_resultWBRNAi00095269
WBRNAi00042364
WBRNAi00095273
WBRNAi00063230
WBRNAi00001993
WBRNAi00063231
Microarray_results (17)
Brief_identificationVitellogenin-2Accession_evidenceUniProtSP:P05690
RNASeq_FPKM (74)
Methodcurated