WormBase Tree Display for Gene: WBGene00006633

WBGene00006633 SMap: S_parent: Sequence: T23D8
  Identity: Version: 1
    Name: CGC_name: tsp-7 Person_evidence: WBPerson522
      Sequence_name: T23D8.2
      Molecular_name: T23D8.2
        T23D8.2.1
        CE26006
      Other_name: CELE_T23D8.2 Accession_evidence: NDB BX284601
      Public_name: tsp-7
    DB_info: Database: AceView gene 1K546
        WormQTL gene WBGene00006633
        WormFlux gene WBGene00006633
        NDB locus_tag CELE_T23D8.2
        Panther gene CAEEL|WormBase=WBGene00006633|UniProtKB=Q9XVI4
          family PTHR19282
        NCBI gene 192062
        RefSeq protein NM_060235.2
        TrEMBL UniProtAcc Q9XVI4
        UniProt_GCRP UniProtAcc Q9XVI4
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tsp
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation: 00102500
      00102501
      00102502
      00114524
    Ortholog (41)
    Paralog (20)
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in DA neuron; head neurons; tail neurons; touch receptor neurons; and ventral cord neurons. Human ortholog(s) of this gene implicated in carotid artery disease and diabetic neuropathy. Is an ortholog of human CD63 (CD63 molecule). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:3407 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1692)
      DOID:9743 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:1692)
  Molecular_info: Corresponding_CDS: T23D8.2
    Corresponding_CDS_history: T23D8.2:wp20
    Corresponding_transcript: T23D8.2.1
    Other_sequence (17)
    Associated_feature: WBsf649536
      WBsf220175
  Experimental_info: RNAi_result: WBRNAi00053919 Inferred_automatically: RNAi_primary
      WBRNAi00035857 Inferred_automatically: RNAi_primary
      WBRNAi00113629 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1390
      Expr4857
      Expr8197
      Expr1011587
      Expr1032753
      Expr1157464
      Expr2017557
      Expr2035695
    Drives_construct: WBCnstr00009858
      WBCnstr00009859
      WBCnstr00012285
      WBCnstr00013172
      WBCnstr00034252
    Construct_product: WBCnstr00034252
    Microarray_results (18)
    Expression_cluster: WBPaper00024970:GABAergic_neuron_specific
      WBPaper00036375:enriched_in_PVD_OLL
      WBPaper00037946:LIN-39_interacting
      WBPaper00037950:A-class-motor-neurons_embryo_enriched
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00044736:flat_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045420:fertilization_upregulated_transcript
      WBPaper00048923:Aging_regulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00051404:alg-2(ok304)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056167:Cry5B_upregulated
      WBPaper00056284:ints-1(RNAi)_downregulated
      WBPaper00056284:ints-11(RNAi)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058948:PA14_downregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060014:set-2(zr2012)_downregulated
      WBPaper00060526:plp-1(ok2155)_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AIN
      WBPaper00061340:AIZ
      WBPaper00061340:AVB
      WBPaper00061340:AVG
      WBPaper00061340:AVL
      WBPaper00061340:DA
      WBPaper00061340:DA_DB
      WBPaper00061340:DB
      WBPaper00061340:DD
      WBPaper00061340:OLQ
      WBPaper00061340:RIC
      WBPaper00061340:RID
      WBPaper00061340:RIV
      WBPaper00061340:RME
      WBPaper00061340:SMB
      WBPaper00061340:SMD
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061527:sol-1-jnk-1_18695
      WBPaper00061651:ALN_enriched
      WBPaper00061651:AS_enriched
      WBPaper00061651:AVL_enriched
      WBPaper00061651:AWC_OFF_enriched
      WBPaper00061651:AWC_ON_enriched
      WBPaper00061651:DA9_enriched
      WBPaper00061651:DA_enriched
      WBPaper00061651:DB01_enriched
      WBPaper00061651:DB_enriched
      WBPaper00061651:PDA_enriched
      WBPaper00061651:PDB_enriched
      WBPaper00061651:PLN_enriched
      WBPaper00061651:RIV_enriched
      WBPaper00061651:RMD_LR_enriched
      WBPaper00061651:SAA_enriched
      WBPaper00061651:SAB_enriched
      WBPaper00061651:SMB_enriched
      WBPaper00061651:SMD_enriched
      WBPaper00061651:VA12_enriched
      WBPaper00061651:VA_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VB02_enriched
      WBPaper00061651:VB_enriched
      WBPaper00061651:VD_DD_enriched
      WBPaper00061902:camt-1(ok515)_regulated_URX-AQR-PQR
      WBPaper00061995:mter-4(syb3662syb3403)_downregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062520:qui-1(db104)_downregulated
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064306:Agaro-oligosaccharides_upregulated
      WBPaper00064494:postdauer_upregulated_AWA
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065623:33
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:6_0
      WBPaper00065841:6_1
      WBPaper00065841:6_2
      WBPaper00065841:6_3
      WBPaper00065841:10_0
      WBPaper00065841:14_0
      WBPaper00065841:14_1
      WBPaper00065841:14_2
      WBPaper00065841:28_0
      WBPaper00065841:29_0
      WBPaper00065841:32_0
      WBPaper00065841:51_0
      WBPaper00065841:51_1
      WBPaper00065841:68_0
      WBPaper00065841:76_0
      WBPaper00065841:87_0
      WBPaper00065841:93_0
      WBPaper00065841:95_0
      WBPaper00065841:111_0
      WBPaper00065841:115_0
      WBPaper00065841:130_0
      WBPaper00065841:132_0
      WBPaper00065841:133_0
      WBPaper00065841:134_0
      WBPaper00065841:136_0
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4386_cluster_6_6
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_A_Class
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00035084:L1_enriched_AIN-2_IP
      WBPaper00035227:heat_shock_regulated
      WBPaper00035560:ahr-1_downregulated
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00036123:Atrazine_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040426:CYE-1_CDK-2AF_downregulated
      WBPaper00040876:mir-35_downregulated
      WBPaper00041174:environmental
      WBPaper00041174:environmental_prime
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_51h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
      WBPaper00042548:miRISC_enriched
      WBPaper00044091:Bpseudomallei_repressed_12h
      WBPaper00045673:colistin_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_allantoin_downregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
    Interaction (18)
  Map_info: Map: I Position: 4.12425 Error: 0.001819
    Positive: Positive_clone: T23D8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00024163
    WBPaper00025141
    WBPaper00038491
    WBPaper00052177
    WBPaper00055090
    WBPaper00056606
    WBPaper00061932
    WBPaper00065330
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene