WormBase Tree Display for Expression_cluster: WBPaper00042548:miRISC_enriched
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| WBPaper00042548:miRISC_enriched | Description | Genes enriched in neuronal miRNA-induced silencing complexes (miRISC) as detected by immunoprecipitations and microarray analysis. | ||
|---|---|---|---|---|
| Species | Caenorhabditis elegans | |||
| Algorithm | Testable genes were defined as having reliable signals in two different biological replicates using the Agilent microarray chip. Multiple probes for the same gene were removed, keeping the probe with the lowest p-value as defined by a one-tailed t-test comparing all testable probes versus probes towards a designated gene. The testable data was then supplemented with the enrichment values (as percent ranks) of a fifth replicate, from another microarray platform GPL5883 (which had a single probe for each gene), and statistical significance was re-calculate. p < 0.001 was the final cutoff. | |||
| Reference | WBPaper00042548 | |||
| Microarray_results (728) | ||||
| Gene (698) | ||||
| Attribute_of | Microarray_experiment | WBPaper00042548:Neuronal-miRISC-IP_vs_Total-RNA_repA | ||
| WBPaper00042548:Neuronal-miRISC-IP_vs_Total-RNA_repB | ||||
| WBPaper00042548:Neuronal-miRISC-IP_vs_Total-RNA_repC | ||||
| WBPaper00042548:Neuronal-miRISC-IP_vs_Total-RNA_repD | ||||
| WBPaper00042548:Neuronal-miRISC-IP_vs_Total-RNA_repE | ||||
| Regulation | Regulated_by_gene | WBGene00015007 | ||
| Associated_with | Anatomy_term | WBbt:0003679 | Enriched | |
| mRNA_tagging |
