WormBase Tree Display for Gene: WBGene00006541
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WBGene00006541 | SMap | S_parent | Sequence | H13N06 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | tbh-1 | Person_evidence | WBPerson268 | |||||
Sequence_name | H13N06.6 | ||||||||
Molecular_name | H13N06.6a | ||||||||
H13N06.6a.1 | |||||||||
CE31553 | |||||||||
H13N06.6b | |||||||||
CE43881 | |||||||||
H13N06.6c | |||||||||
CE50388 | |||||||||
H13N06.6b.1 | |||||||||
H13N06.6c.1 | |||||||||
Other_name | CELE_H13N06.6 | Accession_evidence | NDB | BX284606 | |||||
Public_name | tbh-1 | ||||||||
DB_info | Database (14) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tbh | ||||||||
Allele (99) | |||||||||
Strain | WBStrain00027363 | ||||||||
WBStrain00031863 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (20) | |||||||||
Ortholog (32) | |||||||||
Paralog | WBGene00017671 | ||||||||
WBGene00020556 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Concise_description | tbh-1 encodes a tyramine beta-hydroxylase orthologous to human DBH (OMIM:609312, mutated in dopamine beta-hydroxylase deficiency); TBH-1 activity is required for biosynthesis of the octopamine neurotransmitter. | Paper_evidence | WBPaper00025096 | |||||
WBPaper00031241 | |||||||||
WBPaper00031303 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
WBPerson1823 | |||||||||
WBPerson567 | |||||||||
Date_last_updated | 06 Mar 2014 00:00:00 | ||||||||
Automated_description | Enables tyramine-beta hydroxylase activity. Involved in octopamine biosynthetic process. Located in synapse. Expressed in RICL; RICR; and gonad. Human ortholog(s) of this gene implicated in several diseases, including alcohol use disorder; attention deficit hyperactivity disorder; and dopamine beta-hydroxylase deficiency. Is an ortholog of human DBH (dopamine beta-hydroxylase). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:10024 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2689) | ||||
DOID:1094 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2689) | ||||||
DOID:14330 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2689) | ||||||
DOID:1574 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2689) | ||||||
DOID:0090145 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2689) | ||||||
DOID:10763 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2689) | ||||||
Molecular_info | Corresponding_CDS | H13N06.6a | |||||||
H13N06.6b | |||||||||
H13N06.6c | |||||||||
Corresponding_CDS_history | H13N06.6:wp83 | ||||||||
H13N06.6b:wp246 | |||||||||
Corresponding_transcript | H13N06.6a.1 | ||||||||
H13N06.6b.1 | |||||||||
H13N06.6c.1 | |||||||||
Other_sequence (26) | |||||||||
Associated_feature | WBsf238328 | ||||||||
WBsf238329 | |||||||||
WBsf238330 | |||||||||
Experimental_info | RNAi_result | WBRNAi00016264 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049396 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3721 | ||||||||
Expr4165 | |||||||||
Expr6276 | |||||||||
Expr8276 | |||||||||
Expr16043 | |||||||||
Expr1023515 | |||||||||
Expr1153129 | |||||||||
Expr2017344 | |||||||||
Expr2035480 | |||||||||
Drives_construct | WBCnstr00001277 | ||||||||
WBCnstr00002828 | |||||||||
WBCnstr00005005 | |||||||||
WBCnstr00013232 | |||||||||
WBCnstr00034312 | |||||||||
Construct_product | WBCnstr00034312 | ||||||||
Regulate_expr_cluster | WBPaper00060921:tbh-1(ok1196)_downregulated | ||||||||
WBPaper00060921:tbh-1(ok1196)_upregulated | |||||||||
Antibody | WBAntibody00000844 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (251) | |||||||||
Interaction (171) | |||||||||
WBProcess | WBbiopr:00000001 | ||||||||
Map_info | Map | X | Position | 22.7341 | Error | 0.010816 | |||
Positive | Positive_clone | H13N06 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4927 | |||||||
4273 | |||||||||
5530 | |||||||||
Pseudo_map_position | |||||||||
Reference (49) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |