WormBase Tree Display for Gene: WBGene00017671
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| WBGene00017671 | SMap | S_parent | Sequence | F21F3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pgal-1 | Person_evidence | WBPerson6671 | |||||
| WBPerson3480 | |||||||||
| Sequence_name | F21F3.1 | ||||||||
| Molecular_name | F21F3.1 | ||||||||
| F21F3.1.1 | |||||||||
| CE32870 | |||||||||
| Other_name | CELE_F21F3.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pgal-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 14 Sep 2010 16:06:52 | WBPerson2970 | Name_change | CGC_name | pgal-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pgal | ||||||||
| Allele (62) | |||||||||
| Strain | WBStrain00032656 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00050414 | ||||||||
| 00050415 | |||||||||
| 00050416 | |||||||||
| 00050417 | |||||||||
| 00050418 | |||||||||
| 00050419 | |||||||||
| 00050420 | |||||||||
| 00122989 | |||||||||
| 00122990 | |||||||||
| 00122991 | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00006541 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00020556 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022144 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable metal ion binding activity and peptidylamidoglycolate lyase activity. Predicted to be involved in peptide metabolic process. Predicted to be located in extracellular region. Expressed in head ganglion; nervous system; and tail ganglion. Human ortholog(s) of this gene implicated in prostate adenocarcinoma. Is an ortholog of human PAM (peptidylglycine alpha-amidating monooxygenase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:2526 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:8596) | ||||
| Molecular_info | Corresponding_CDS | F21F3.1 | |||||||
| Corresponding_CDS_history | F21F3.1:wp90 | ||||||||
| Corresponding_transcript | F21F3.1.1 | ||||||||
| Other_sequence (142) | |||||||||
| Associated_feature | WBsf643250 | ||||||||
| WBsf643251 | |||||||||
| WBsf656263 | |||||||||
| WBsf656264 | |||||||||
| WBsf983533 | |||||||||
| WBsf983534 | |||||||||
| WBsf1009729 | |||||||||
| WBsf217592 | |||||||||
| WBsf217593 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045216 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031228 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001391 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094865 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003415 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13714 | ||||||||
| Expr1027731 | |||||||||
| Expr1037584 | |||||||||
| Expr1149149 | |||||||||
| Expr2014855 | |||||||||
| Expr2033090 | |||||||||
| Drives_construct | WBCnstr00027114 | ||||||||
| WBCnstr00039951 | |||||||||
| Construct_product | WBCnstr00027114 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (308) | |||||||||
| Interaction (114) | |||||||||
| Map_info | Map | I | Position | -0.619151 | Error | 0.014097 | |||
| Positive | Positive_clone | F21F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
