WormBase Tree Display for Gene: WBGene00017671

WBGene00017671 SMap: S_parent: Sequence: F21F3
  Identity: Version: 2
    Name: CGC_name: pgal-1 Person_evidence: WBPerson6671
            WBPerson3480
      Sequence_name: F21F3.1
      Molecular_name: F21F3.1
        F21F3.1.1
        CE32870
      Other_name: CELE_F21F3.1 Accession_evidence: NDB BX284601
      Public_name: pgal-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 14 Sep 2010 16:06:52 WBPerson2970 Name_change: CGC_name: pgal-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pgal
    Allele (62)
    Strain: WBStrain00032656
    RNASeq_FPKM (74)
    GO_annotation: 00050414
      00050415
      00050416
      00050417
      00050418
      00050419
      00050420
      00122989
      00122990
      00122991
    Ortholog (39)
    Paralog: WBGene00006541 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00020556 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022144 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable metal ion binding activity and peptidylamidoglycolate lyase activity. Predicted to be involved in peptide metabolic process. Predicted to be located in extracellular region. Expressed in head ganglion; nervous system; and tail ganglion. Human ortholog(s) of this gene implicated in prostate adenocarcinoma. Is an ortholog of human PAM (peptidylglycine alpha-amidating monooxygenase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:2526 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:8596)
  Molecular_info: Corresponding_CDS: F21F3.1
    Corresponding_CDS_history: F21F3.1:wp90
    Corresponding_transcript: F21F3.1.1
    Other_sequence: EX013884.1
      FG981169.1
      NAC00404_1
      PTC00990_1
      MIC00483_1
      CBC00529_1
      FK807301.1
      FG971808.1
      GR977804.1
      BMC01190_1
      MC03527
      FG976227.1
      Oden_isotig00003
      BE225324.1
      ACC01957_1
      MJ04959
      MIC00483_2
      ES672782.1
      ACC00430_2
      BU087699.1
      BU088050.1
      MHC05709_1
      FK805126.1
      PT01173
      FG974695.1
      AE01294
      FK799946.1
      BU666832.1
      MH01190
      Oden_isotig00007
      CD455585.1
      BU666392.1
      FK809893.1
      EX007778.1
      BU087781.1
      FF680120.1
      MJC04436_1
      HSC00893_1
      FK806142.1
      BG467636.1
      JI173144.1
      FG978687.1
      Dviv_isotig13589
      MI03584
      EX541373.1
      Oden_isotig00002
      FD517077.1
      FK801074.1
      FK801980.1
      AS00614
      BU087525.1
      HS00351
      MHC06792_1
      MH08851
      FK799833.1
      MI02596
      MJ00654
      EX008825.1
      AYC02220_1
      FC543737.1
      MI00702
      BG467618.1
      CV199451.1
      BU666721.1
      CBC00529_2
      AM743684.1
      FK802493.1
      BE239067.1
      BU086904.1
      FK802555.1
      FK804703.1
      FC540308.1
      EV851225.1
      WBC01096_1
      FK809690.1
      MI03852
      FK809924.1
      MIC00011_1
      DA02777
      OOC02667_1
      MH02424
      FK804819.1
      CRC02623_1
      FD517021.1
      OOC01844_1
      RSC02758_1
      FK800140.1
      AS08029
      BU087415.1
      EV850971.1
      TDC02366_1
      FK808112.1
      MI01998
      MI00728
      FG976311.1
      Tcol_isotig08236
      EY459597.1
      FG971738.1
      MCC01254_1
      CSC00942_1
      DVC00445_1
      FK806621.1
      OOC01844_2
      MI02561
      MI01007
      FK799802.1
      ASC00607_1
      GRC03353_1
      FK805409.1
      FG588767.1
      BE225422.1
      BU666786.1
      PVC00026_1
      EV850995.1
      CV200899.1
      BU087241.1
      FK806281.1
      FF680491.1
      MHC06425_1
      HBC00196_1
      FG977190.1
      BU666619.1
      CR04453
      Tcol_isotig08237
      MIC00011_2
      HBC16614_1
      FD516704.1
      FG978245.1
      SC00950
      CV199725.1
      Acan_isotig09666
      EV851464.1
      RS08984
      RS06862
      DAC02331_1
      MI01037
      MI02437
      EY464739.1
      Hbac_isotig01934
      HBC18712_1
      FG978040.1
      ACC00430_1
    Associated_feature: WBsf643250
      WBsf643251
      WBsf656263
      WBsf656264
      WBsf983533
      WBsf983534
      WBsf1009729
      WBsf217592
      WBsf217593
  Experimental_info: RNAi_result: WBRNAi00045216 Inferred_automatically: RNAi_primary
      WBRNAi00031228 Inferred_automatically: RNAi_primary
      WBRNAi00001391 Inferred_automatically: RNAi_primary
      WBRNAi00094865 Inferred_automatically: RNAi_primary
      WBRNAi00003415 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13714
      Expr1027731
      Expr1037584
      Expr1149149
      Expr2014855
      Expr2033090
    Drives_construct: WBCnstr00027114
      WBCnstr00039951
    Construct_product: WBCnstr00027114
    Microarray_results (20)
    Expression_cluster (308)
    Interaction (114)
  Map_info: Map: I Position: -0.619151 Error: 0.014097
    Positive: Positive_clone: F21F3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene