WormBase Tree Display for Gene: WBGene00022144
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| WBGene00022144 | SMap | S_parent | Sequence | Y71G12B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pghm-1 | Person_evidence | WBPerson6671 | |||||
| WBPerson3480 | |||||||||
| Sequence_name | Y71G12B.4 | ||||||||
| Molecular_name | Y71G12B.4 | ||||||||
| Y71G12B.4.1 | |||||||||
| CE26253 | |||||||||
| Other_name | CELE_Y71G12B.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pghm-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 14 Sep 2010 16:06:52 | WBPerson2970 | Name_change | CGC_name | pghm-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pghm | ||||||||
| Allele (100) | |||||||||
| Strain | WBStrain00032413 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00017671 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00020556 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable copper ion binding activity and peptidylglycine monooxygenase activity. Predicted to be involved in peptide metabolic process. Predicted to be located in extracellular region and membrane. Expressed in head ganglion; nervous system; and tail ganglion. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y71G12B.4 | |||||||
| Corresponding_transcript | Y71G12B.4.1 | ||||||||
| Other_sequence (107) | |||||||||
| Associated_feature | WBsf643062 | ||||||||
| WBsf643063 | |||||||||
| WBsf982758 | |||||||||
| WBsf1009252 | |||||||||
| WBsf217249 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00065282 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058220 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004824 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002239 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004830 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13713 | ||||||||
| Expr1028300 | |||||||||
| Expr1039751 | |||||||||
| Expr1161639 | |||||||||
| Expr2014858 | |||||||||
| Expr2033093 | |||||||||
| Drives_construct | WBCnstr00024339 | ||||||||
| WBCnstr00039950 | |||||||||
| Construct_product | WBCnstr00024339 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (316) | |||||||||
| Map_info | Map | I | Position | -12.7956 | Error | 0.053624 | |||
| Positive | Positive_clone | Y71G12B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00053772 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
