WormBase Tree Display for Gene: WBGene00022144

WBGene00022144 SMap: S_parent: Sequence: Y71G12B
  Identity: Version: 2
    Name: CGC_name: pghm-1 Person_evidence: WBPerson6671
            WBPerson3480
      Sequence_name: Y71G12B.4
      Molecular_name: Y71G12B.4
        Y71G12B.4.1
        CE26253
      Other_name: CELE_Y71G12B.4 Accession_evidence: NDB BX284601
      Public_name: pghm-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 14 Sep 2010 16:06:52 WBPerson2970 Name_change: CGC_name: pghm-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pghm
    Allele (100)
    Strain: WBStrain00032413
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog: WBGene00040812 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00060512 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144098 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00162516 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00133787 Caenorhabditis japonica From_analysis: OMA
            WormBase-Compara
      WBGene00103118 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00227313 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9770 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g8208 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13958 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7433 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6643 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g22704 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g24185 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1420 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21228 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13076 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2914 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00022.g1388 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_19632.g26289 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-pghm-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8443 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_04907.g34019 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_05327.g34800 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17371 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001154 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12058 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g7202 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10240500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g244 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00214106 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00237407 Onchocerca volvulus From_analysis: WormBase-Compara
      FB:FBgn0283509 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00017671 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00020556 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable copper ion binding activity and peptidylglycine monooxygenase activity. Predicted to be involved in peptide metabolic process. Predicted to be located in extracellular region and membrane. Expressed in head ganglion; nervous system; and tail ganglion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y71G12B.4
    Corresponding_transcript: Y71G12B.4.1
    Other_sequence (107)
    Associated_feature: WBsf643062
      WBsf643063
      WBsf982758
      WBsf1009252
      WBsf217249
  Experimental_info: RNAi_result: WBRNAi00065282 Inferred_automatically: RNAi_primary
      WBRNAi00058220 Inferred_automatically: RNAi_primary
      WBRNAi00004824 Inferred_automatically: RNAi_primary
      WBRNAi00002239 Inferred_automatically: RNAi_primary
      WBRNAi00004830 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13713
      Expr1028300
      Expr1039751
      Expr1161639
      Expr2014858
      Expr2033093
    Drives_construct: WBCnstr00024339
      WBCnstr00039950
    Construct_product: WBCnstr00024339
    Microarray_results (26)
    Expression_cluster (316)
  Map_info: Map: I Position: -12.7956 Error: 0.053624
    Positive: Positive_clone: Y71G12B Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00053772
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene